RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 FAM102BQ5T8I3 360 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 CREB3L3Q68CJ9 461 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 GALNT17Q6IS24 598 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 SWSAP1Q6NVH7 229 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 PDXDC1Q6P996 788 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 MOXD1Q6UVY6 613 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 DDX53Q86TM3 631 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 ECHDC2Q86YB7 292 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 GPR65Q8IYL9 337 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 SLC39A11Q8N1S5 342 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 LINC01356Q8N9X3 169 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 RNF169Q8NCN4 708 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 CMASQ8NFW8 434 aaPredicted RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 HDAC7Q8WUI4 952 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 TRAPPC12Q8WVT3 735 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 SECISBP2LQ93073 1101 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 CCDC43Q96MW1 224 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 CASD1Q96PB1 797 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 NOX5Q96PH1 765 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 FAM193BQ96PV7 902 aaPredicted RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 PCYT2Q99447 389 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 SPATA25Q9BR10 227 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 TMEM175Q9BSA9 504 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 AARSD1Q9BTE6 412 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 SPATA9Q9BWV2 254 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 TEKT3Q9BXF9 490 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 RNF26Q9BY78 433 aaPredicted RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 ZBP1Q9H171 429 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 CWH43Q9H720 699 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 SH3GLB2Q9NR46 395 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.9□□□□□ -1.79
XRN1-209ENST00000472625 MRPL17Q9NRX2 175 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 SIRPGQ9P1W8 387 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 GABBR1Q9UBS5 961 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 DUSP12Q9UNI6 340 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 PIN4Q9Y237 131 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 TIMM13Q9Y5L4 95 aaPredicted RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 TTC3P53804 2025 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 NLRC5Q86WI3 1866 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 ZNF318Q5VUA4 2279 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 TRIP12Q14669 1992 aaPredicted RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 IGLV3-22A0A075B6J6 115 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 PRR23AA6NEV1 266 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 HIDE1A8MVS5 230 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 C2CD4DB7Z1M9 353 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 C22orf46C9J442 243 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 FAM86B1E9PN63 330 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 CPLX1O14810 134 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 ASAP2O43150 1006 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 PRODHO43272 600 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 EPB41L2O43491 1005 aaKnown RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 PRICKLE3O43900 615 aaPredicted RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 MGEA5O60502 916 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 EIF5BO60841 1220 aaKnown RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 ZNF623O75123 536 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 GPR32O75388 356 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 CDC45O75419 566 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 TADA3O75528 432 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 ERLIN2O94905 339 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 REC8O95072 547 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 CCNE2O96020 404 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 GLUD1P00367 558 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 IGHDP01880 384 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 LMNAP02545 664 aaKnown RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 VTNP04004 478 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 C8BP07358 591 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 FAM86B2P0C5J1 330 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 ARP10275 920 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 GCFC2P16383 781 aaKnown RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 PFKLP17858 780 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 RXRAP19793 462 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 AXLP30530 894 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 SLC6A11P48066 632 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 CLCN3P51790 818 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 VCPP55072 806 aaKnown RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 BCAR1P56945 870 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 KCNAB2Q13303 367 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 TFDP1Q14186 410 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 RTP5Q14D33 572 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 LETM2Q2VYF4 491 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 Q4G0T1 1027 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 EMC4Q5J8M3 183 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 NOMO2Q5JPE7 1267 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 LRCH2Q5VUJ6 765 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 PPP4R3AQ6IN85 833 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 IQCEQ6IPM2 695 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 EFCAB12Q6NXP0 572 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 NOTUMQ6P988 496 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 SYCE2Q6PIF2 218 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 CATSPER4Q7RTX7 472 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 APBB1IPQ7Z5R6 666 aaPredicted RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 SRGAP1Q7Z6B7 1085 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 RTN4RL1Q86UN2 441 aaPredicted RBP3.89□□□□□ -1.79
XRN1-209ENST00000472625 CCDC105Q8IYK2 499 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 VPS52Q8N1B4 723 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 FBXL16Q8N461 479 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 FAM26EQ8N5C1 309 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 LINC01465Q8N7H1 131 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 VN1R2Q8NFZ6 395 aa3.89□□□□□ -1.79
XRN1-209ENST00000472625 EXOC6Q8TAG9 804 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms