RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ZNF606Q8WXB4 792 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 KCTD13Q8WZ19 329 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 TFAP2BQ92481 460 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 DNASE1L2Q92874 299 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 CDK5RAP1Q96SZ6 601 aaKnown RBP14.97□□□□□ -0.01
BRCA1-211ENST00000472490 STK33Q9BYT3 514 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 BRD9Q9H8M2 597 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 FAM207AQ9NSI2 230 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-211ENST00000472490 USP3Q9Y6I4 520 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 C2orf78A6NCI8 922 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 TMEM221A6NGB7 291 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 M0R296 226 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 FOXN3O00409 490 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-211ENST00000472490 CHADO15335 359 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 CYP26A1O43174 497 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 NARSO43776 548 aaKnown RBP14.96□□□□□ -0.01
BRCA1-211ENST00000472490 OAS1P00973 400 aaKnown RBP14.96□□□□□ -0.01
BRCA1-211ENST00000472490 CFHP08603 1231 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 ZDHHC11BP0C7U3 371 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 KRT9P35527 623 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 FCHO2Q0JRZ9 810 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 SYCP1Q15431 976 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 PKDCCQ504Y2 493 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 ARHGAP29Q52LW3 1261 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 RAB41Q5JT25 222 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 GPRIN1Q7Z2K8 1008 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 LUZP1Q86V48 1076 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 DDX42Q86XP3 938 aaKnown RBP eCLIP14.96□□□□□ -0.01
BRCA1-211ENST00000472490 FMNL3Q8IVF7 1028 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 FAM71AQ8IYT1 594 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 KIAA1958Q8N8K9 716 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 NEK11Q8NG66 645 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 SLC35F5Q8WV83 523 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 USP13Q92995 863 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-211ENST00000472490 SHDQ96IW2 340 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 HSFY1Q96LI6 401 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 SPAG5Q96R06 1193 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 ERGIC2Q96RQ1 377 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 PLA2G2FQ9BZM2 168 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 TRPV5Q9NQA5 729 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 GMIPQ9P107 970 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 ARHGAP26Q9UNA1 814 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 CEP83Q9Y592 693 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 FHOD1Q9Y613 1164 aa14.96□□□□□ -0.01
BRCA1-211ENST00000472490 A0A0C4DFX4 3053 aa14.96□□□□□ -0.02
BRCA1-211ENST00000472490 PRR33A8MZF0 331 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 TLR5O60602 858 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 PRAMEF12O95522 483 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 OLFM2O95897 454 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 ZBED1O96006 694 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 RALAP11233 206 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 TCF3P15923 654 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 GDI1P31150 447 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 ACADSBP45954 432 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 TKTL1P51854 596 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 SNX16P57768 344 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 POLR2FP61218 127 aaKnown RBP14.95□□□□□ -0.02
BRCA1-211ENST00000472490 SLC7A9P82251 487 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 GOLGA8FQ08AF8 430 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 GOLGA8DPQ0D2H9 430 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 GRM2Q14416 872 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 DPY19L2P1Q6NXN4 242 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 LRSAM1Q6UWE0 723 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 APTXQ7Z2E3 356 aaKnown RBP14.95□□□□□ -0.02
BRCA1-211ENST00000472490 BMP8AQ7Z5Y6 402 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 STK32AQ8WU08 396 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 SECISBP2LQ93073 1101 aaKnown RBP14.95□□□□□ -0.02
BRCA1-211ENST00000472490 ASIC4Q96FT7 647 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 CYP2S1Q96SQ9 504 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 NAA15Q9BXJ9 866 aaKnown RBP14.95□□□□□ -0.02
BRCA1-211ENST00000472490 SMG9Q9H0W8 520 aaKnown RBP14.95□□□□□ -0.02
BRCA1-211ENST00000472490 MFSD1Q9H3U5 465 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 SMOC2Q9H3U7 446 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 TSPY26PQ9H489 355 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 RTN4Q9NQC3 1192 aaKnown RBP14.95□□□□□ -0.02
BRCA1-211ENST00000472490 CNGB3Q9NQW8 809 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 CLIC5Q9NZA1 410 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 SIK3Q9Y2K2 1263 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 C5orf42Q9H799 3197 aa14.95□□□□□ -0.02
BRCA1-211ENST00000472490 MUC3AQ02505 3323 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 F8VZ95 297 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 SART1O43290 800 aaKnown RBP14.94□□□□□ -0.02
BRCA1-211ENST00000472490 ATP5C1P36542 298 aaKnown RBP14.94□□□□□ -0.02
BRCA1-211ENST00000472490 PM20D1Q6GTS8 502 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 KLHDC10Q6PID8 442 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 C1orf228Q6PIY5 440 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 SIX5Q8N196 739 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 SCML4Q8N228 414 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 ZNF276Q8N554 614 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 CSGALNACT1Q8TDX6 532 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 GOLGA1Q92805 767 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 PBXIP1Q96AQ6 731 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 NOX5Q96PH1 765 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 PDCL3Q9H2J4 239 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 CYLDQ9NQC7 956 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 ARHGEF3Q9NR81 526 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 NAGPAQ9UK23 515 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 PCDHGC3Q9UN70 934 aa14.94□□□□□ -0.02
BRCA1-211ENST00000472490 A0A1W2PQC6 194 aa14.93□□□□□ -0.02
BRCA1-211ENST00000472490 COCHO43405 550 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms