RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 NR2F2P24468 414 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 OPRD1P41143 372 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 NFIL3Q16649 462 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 HECTD3Q5T447 861 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 SYT13Q7L8C5 426 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 UNC93AQ86WB7 457 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 DDX42Q86XP3 938 aaKnown RBP eCLIP23.9■■□□□ 1.42
C9orf3-213ENST00000471978 CRYBG2Q8N1P7 616 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 CCDC26Q8TAB7 109 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 SLC2A14Q8TDB8 520 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 ACDQ96AP0 544 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 GOLPH3LQ9H4A5 285 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.9■■□□□ 1.424e-8■■■■■ 298.1
C9orf3-213ENST00000471978 IL37Q9NZH6 218 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 HMGXB4Q9UGU5 601 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 COCHO43405 550 aa23.89■■□□□ 1.41
C9orf3-213ENST00000471978 AKAP3O75969 853 aa23.89■■□□□ 1.41
C9orf3-213ENST00000471978 ASPAP45381 313 aa23.89■■□□□ 1.41
C9orf3-213ENST00000471978 DMC1Q14565 340 aa23.89■■□□□ 1.41
C9orf3-213ENST00000471978 CSRP2Q16527 193 aa23.89■■□□□ 1.41
C9orf3-213ENST00000471978 GAB4Q2WGN9 574 aa23.89■■□□□ 1.41
C9orf3-213ENST00000471978 INTS8Q75QN2 995 aaKnown RBP23.89■■□□□ 1.41
C9orf3-213ENST00000471978 CACNA2D4Q7Z3S7 1137 aa23.89■■□□□ 1.41
C9orf3-213ENST00000471978 COMMD8Q9NX08 183 aa23.89■■□□□ 1.41
C9orf3-213ENST00000471978 NCOR2Q9Y618 2525 aa23.89■■□□□ 1.41
C9orf3-213ENST00000471978 AXIN1O15169 862 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 ZNF202O95125 648 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 TRIM49P0CI25 452 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 TRIM49CP0CI26 452 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 KRT13P13646 458 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 GCLMP48507 274 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 DHCR24Q15392 516 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 SNX30Q5VWJ9 437 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 PRR23CQ6ZRP0 262 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 KBTBD6Q86V97 674 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 FAM186BQ8IYM0 893 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 GUF1Q8N442 669 aaKnown RBP23.88■■□□□ 1.41
C9orf3-213ENST00000471978 C12orf29Q8N999 325 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 ZMIZ2Q8NF64 920 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 SMOQ99835 787 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 IMPG2Q9BZV3 1241 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 FAM49BQ9NUQ9 324 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 GMIPQ9P107 970 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 GTF3C3Q9Y5Q9 886 aa23.88■■□□□ 1.41
C9orf3-213ENST00000471978 K7EQS6 105 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 BEST1O76090 585 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 APBB3O95704 486 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 TRIM21P19474 475 aaKnown RBP23.87■■□□□ 1.41
C9orf3-213ENST00000471978 RPL13P26373 211 aaKnown RBP23.87■■□□□ 1.41
C9orf3-213ENST00000471978 SEC13P55735 322 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 MAP3K7CLP57077 242 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 ADAM9Q13443 819 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 RTKNQ9BST9 563 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 CCSER2Q9H7U1 834 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 GDPD2Q9HCC8 539 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 CSNK1G1Q9HCP0 422 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 TBC1D14Q9P2M4 693 aa23.87■■□□□ 1.41
C9orf3-213ENST00000471978 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.86■■□□□ 1.41
C9orf3-213ENST00000471978 E2F8A0AVK6 867 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 FAM92AA1XBS5 289 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 ADH1CP00326 375 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 ZDHHC11BP0C7U3 371 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 PSMC2P35998 433 aaKnown RBP23.86■■□□□ 1.41
C9orf3-213ENST00000471978 TUBP50607 506 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 PPP3CAQ08209 521 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 C2orf27AQ580R0 203 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 RHBDF2Q6PJF5 856 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 NETO1Q8TDF5 533 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 TAS1R2Q8TE23 839 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 USP33Q8TEY7 942 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 LOXL4Q96JB6 756 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 ZFRQ96KR1 1074 aaKnown RBP23.86■■□□□ 1.41
C9orf3-213ENST00000471978 ARRDC1-AS1Q9H2J1 176 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 MMRN2Q9H8L6 949 aa23.86■■□□□ 1.41
C9orf3-213ENST00000471978 APOBEC3GQ9HC16 384 aaKnown RBP23.86■■□□□ 1.41
C9orf3-213ENST00000471978 MYO16Q9Y6X6 1858 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 FAM200BP0CF97 657 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 ADORA2BP29275 332 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 SLC6A11P48066 632 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 ENPEPQ07075 957 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 INCA1Q0VD86 236 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 PNKPQ96T60 521 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 NACA2Q9H009 215 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 FBXO44Q9H4M3 255 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 CYP3A43Q9HB55 503 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 EBF1Q9UH73 591 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 SH3BP1Q9Y3L3 701 aa23.85■■□□□ 1.41
C9orf3-213ENST00000471978 KIAA1549LQ6ZVL6 1849 aa23.84■■□□□ 1.41
C9orf3-213ENST00000471978 SDK1Q7Z5N4 2213 aa23.84■■□□□ 1.41
C9orf3-213ENST00000471978 DCDC2BA2VCK2 349 aa23.84■■□□□ 1.41
C9orf3-213ENST00000471978 FOXD2O60548 495 aaPredicted RBP23.84■■□□□ 1.41
C9orf3-213ENST00000471978 ADH5P11766 374 aa23.84■■□□□ 1.41
C9orf3-213ENST00000471978 TSTD1Q8NFU3 115 aa23.84■■□□□ 1.41
C9orf3-213ENST00000471978 CCDC34Q96HJ3 373 aa23.84■■□□□ 1.41
C9orf3-213ENST00000471978 ZC3H10Q96K80 434 aaKnown RBP23.84■■□□□ 1.41
C9orf3-213ENST00000471978 TWNKQ96RR1 684 aa23.84■■□□□ 1.41
C9orf3-213ENST00000471978 HNRNPABQ99729 332 aaKnown RBP23.84■■□□□ 1.41
C9orf3-213ENST00000471978 NT5C1AQ9BXI3 368 aa23.84■■□□□ 1.41
C9orf3-213ENST00000471978 NIF3L1Q9GZT8 377 aa23.84■■□□□ 1.41
C9orf3-213ENST00000471978 RALGAPA1Q6GYQ0 2036 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms