RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 TBX3O15119 743 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 RGS10O43665 173 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 MARCH6O60337 910 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 CTNND1O60716 968 aaKnown RBP4.69□□□□□ -1.66
RBM39-228ENST00000471635 RASAL1O95294 804 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 NR4A2P43354 598 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 MTHFSP49914 203 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 COPB1P53618 953 aaKnown RBP4.69□□□□□ -1.66
RBM39-228ENST00000471635 BCAT1P54687 386 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 IGBP1P78318 339 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 LMAN2Q12907 356 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 ZNF260Q3ZCT1 412 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 AWAT1Q58HT5 328 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 SWSAP1Q6NVH7 229 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 ZNF813Q6ZN06 617 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 PTCHD4Q6ZW05 846 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 MAEAQ7L5Y9 396 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 KCTD20Q7Z5Y7 419 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 HMCESQ96FZ2 354 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 ZC3H10Q96K80 434 aaKnown RBP4.69□□□□□ -1.66
RBM39-228ENST00000471635 PPP1R9BQ96SB3 815 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 ZNF518BQ9C0D4 1074 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 SACM1LQ9NTJ5 587 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 USP22Q9UPT9 525 aa4.69□□□□□ -1.66
RBM39-228ENST00000471635 CAPN8A6NHC0 703 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 H7C4K7 107 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 TRIM38O00635 465 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 ADAM10O14672 748 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 RFPL1O75677 317 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 RASSF9O75901 435 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 ITGA8P53708 1063 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 SUMO3P55854 103 aaPredicted RBP4.68□□□□□ -1.66
RBM39-228ENST00000471635 FHL1Q13642 323 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 INSCQ1MX18 579 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 AWAT2Q6E213 333 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 SHC4Q6S5L8 630 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 OSR1Q8TAX0 266 aaPredicted RBP4.68□□□□□ -1.66
RBM39-228ENST00000471635 SPSB4Q96A44 273 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 C22orf23Q9BZE7 217 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 A1CFQ9NQ94 594 aaKnown RBP4.68□□□□□ -1.66
RBM39-228ENST00000471635 DNMT3BQ9UBC3 853 aaKnown RBP4.68□□□□□ -1.66
RBM39-228ENST00000471635 CPNE7Q9UBL6 633 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 NOB1Q9ULX3 412 aaKnown RBP4.68□□□□□ -1.66
RBM39-228ENST00000471635 AFG3L2Q9Y4W6 797 aa4.68□□□□□ -1.66
RBM39-228ENST00000471635 BTBD19C9JJ37 291 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 NTN1O95631 604 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 MT-CO3P00414 261 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 A1BGP04217 495 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 CREB1P16220 341 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 EPHA3P29320 983 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 UQCRC1P31930 480 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 DIO1P49895 249 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 EPHB1P54762 984 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 GHRHRQ02643 423 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 LAMB3Q13751 1172 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 CNN3Q15417 329 aaKnown RBP4.67□□□□□ -1.66
RBM39-228ENST00000471635 MEX3CQ5U5Q3 659 aaKnown RBP4.67□□□□□ -1.66
RBM39-228ENST00000471635 TMEM65Q6PI78 240 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 RAB11FIP4Q86YS3 637 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 NRACQ8N912 160 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 CUL5Q93034 780 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 SUCLG2Q96I99 432 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 ZBTB45Q96K62 511 aaPredicted RBP4.67□□□□□ -1.66
RBM39-228ENST00000471635 VN1R3Q9BXE9 311 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 STK31Q9BXU1 1019 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 XPNPEP3Q9NQH7 507 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 SNX15Q9NRS6 342 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 STK32BQ9NY57 414 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 PAXBP1Q9Y5B6 917 aa4.67□□□□□ -1.66
RBM39-228ENST00000471635 CFAP69A5D8W1 941 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 MBD3L4A6NDZ8 208 aaPredicted RBP4.66□□□□□ -1.66
RBM39-228ENST00000471635 MBD3L3A6NE82 208 aaPredicted RBP4.66□□□□□ -1.66
RBM39-228ENST00000471635 PYCARD-AS1I3L0S3 204 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 SOCS2O14508 198 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 CD3EAPO15446 510 aaKnown RBP4.66□□□□□ -1.66
RBM39-228ENST00000471635 RNF8O76064 485 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 FGBP02675 491 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 APEHP13798 732 aaKnown RBP4.66□□□□□ -1.66
RBM39-228ENST00000471635 HGFP14210 728 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 BRAFP15056 766 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 PHKG2P15735 406 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 PTDSS1P48651 473 aaKnown RBP4.66□□□□□ -1.66
RBM39-228ENST00000471635 POLGP54098 1239 aaPredicted RBP4.66□□□□□ -1.66
RBM39-228ENST00000471635 DENND2CQ68D51 928 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 APOA5Q6Q788 366 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 MICU3Q86XE3 530 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 KRT73Q86Y46 540 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 RUNDC1Q96C34 613 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 TMEM79Q9BSE2 394 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 WACQ9BTA9 647 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 TRIM5Q9C035 493 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 TMEM60Q9H2L4 133 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 HDAC9Q9UKV0 1011 aa4.66□□□□□ -1.66
RBM39-228ENST00000471635 LOC102723971A0A1B0GUV8 181 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 TRIM43BA6NCK2 446 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 FAM227AF5H4B4 570 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 M0R3H8 397 aa4.65□□□□□ -1.67
RBM39-228ENST00000471635 SPRY2O43597 315 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms