RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 KLK14Q9P0G3 267 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 CDH9Q9ULB4 789 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 L1RE1Q9UN81 338 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 TFR2Q9UP52 801 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 HCFC2Q9Y5Z7 792 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 ALG6Q9Y672 507 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 TARSL2A2RTX5 802 aaKnown RBP9.63□□□□□ -0.87
PTPRE-207ENST00000471218 TMEM191CA6NGB0 347 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 C2orf71A6NGG8 1288 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 H0Y858 1186 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 CCDC188H7C350 402 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 M0QYV0 167 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 PGRMC1O00264 195 aaKnown RBP9.63□□□□□ -0.87
PTPRE-207ENST00000471218 SYN3O14994 580 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 SPTLC1O15269 473 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 MICAL2O94851 1124 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 FGFR1P11362 822 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 RRM1P23921 792 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 PLA2G4AP47712 749 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 CDH8P55286 799 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 SMARCB1Q12824 385 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 CCDC181Q5TID7 509 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 KIAA1841Q6NSI8 718 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 LLGL2Q6P1M3 1020 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 MMS22LQ6ZRQ5 1243 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 POLNQ7Z5Q5 900 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 VSIG1Q86XK7 387 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 GPIHBP1Q8IV16 184 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 SLC39A11Q8N1S5 342 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 SCML4Q8N228 414 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 VN1R2Q8NFZ6 395 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 OR6B3Q8NGW1 331 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 FEZF2Q8TBJ5 459 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 MAIP1Q8WWC4 291 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 CPA5Q8WXQ8 436 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 NKD2Q969F2 451 aaPredicted RBP9.63□□□□□ -0.87
PTPRE-207ENST00000471218 NXPE3Q969Y0 559 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 MCRS1Q96EZ8 462 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 RUNDC3BQ96NL0 473 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 TWNKQ96RR1 684 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 PHOX2BQ99453 314 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 C11orf70Q9BRQ4 267 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 TRIM62Q9BVG3 475 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 EMILIN2Q9BXX0 1053 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 SYNCQ9H7C4 482 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 OSGEPQ9NPF4 335 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 ANAPC7Q9UJX3 599 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 TSPAN16Q9UKR8 245 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 PCDHB8Q9UN66 801 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 PCDHA3Q9Y5H8 950 aa9.63□□□□□ -0.87
PTPRE-207ENST00000471218 GOLGA6L10A0A0M3HER8 536 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 HIDE1A8MVS5 230 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 ENC1O14682 589 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 PPEF2O14830 753 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 XPO1O14980 1071 aaKnown RBP9.62□□□□□ -0.87
PTPRE-207ENST00000471218 SPOPO43791 374 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 FBXO21O94952 628 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 FTCDO95954 541 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 GLI1P08151 1106 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 CTSAP10619 480 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 CA8P35219 290 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 CETN2P41208 172 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 RAP1GAPP47736 663 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 CLCNKBP51801 687 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 VCPP55072 806 aaKnown RBP9.62□□□□□ -0.87
PTPRE-207ENST00000471218 PTPN20Q4JDL3 420 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 ZNF394Q53GI3 561 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 CLLU1OSQ5K130 101 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 DENND1BQ6P3S1 775 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 DDX53Q86TM3 631 aaKnown RBP9.62□□□□□ -0.87
PTPRE-207ENST00000471218 GPR65Q8IYL9 337 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 THEM5Q8N1Q8 247 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 MMGT1Q8N4V1 131 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 WDTC1Q8N5D0 677 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 EIF1ADQ8N9N8 165 aaKnown RBP9.62□□□□□ -0.87
PTPRE-207ENST00000471218 SLC35F5Q8WV83 523 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 KCTD13Q8WZ19 329 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 CEP295NLQ96MC4 621 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 MRPL45Q9BRJ2 306 aaKnown RBP9.62□□□□□ -0.87
PTPRE-207ENST00000471218 CARD6Q9BX69 1037 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 ASNSD1Q9NWL6 643 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 IGSF9Q9P2J2 1179 aa9.62□□□□□ -0.87
PTPRE-207ENST00000471218 FNDC1Q4ZHG4 1894 aaPredicted RBP9.62□□□□□ -0.87
PTPRE-207ENST00000471218 MYO10Q9HD67 2058 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 ZNF487B1APH4 448 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 DPYSL4O14531 572 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 KCNK3O14649 394 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 DDX3YO15523 660 aaKnown RBP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 CLASP2O75122 1294 aaKnown RBP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 B3GAT3O94766 335 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 OAZ2O95190 189 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 C1RP00736 705 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 ALDH2P05091 517 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 KRT3P12035 628 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 NPR3P17342 541 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 PTPN1P18031 435 aaKnown RBP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 COMTP21964 271 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms