RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 LCA5Q86VQ0 697 aa10.91□□□□□ -0.66
RRP1B-202ENST00000470886 GLIS3Q8NEA6 775 aa10.91□□□□□ -0.66
RRP1B-202ENST00000470886 ZNF669Q96BR6 464 aaPredicted RBP10.91□□□□□ -0.66
RRP1B-202ENST00000470886 MBOAT7Q96N66 472 aa10.91□□□□□ -0.66
RRP1B-202ENST00000470886 DNAJC5Q9H3Z4 198 aa10.91□□□□□ -0.66
RRP1B-202ENST00000470886 ROBO1Q9Y6N7 1651 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 MEIS2O14770 477 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 OPLAHO14841 1288 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 NCAM2O15394 837 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 TLR2O60603 784 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 SERPINE1P05121 402 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 MPOP05164 745 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 RALBP11234 206 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 BGNP21810 368 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 CPA2P48052 419 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 NR2C2P49116 596 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 CACNA2D1P54289 1103 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 PKN2Q16513 984 aaKnown RBP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 FKBP1CQ5VVH2 108 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 LRRC74BQ6ZQY2 392 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 EXOC3L1Q86VI1 746 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 MYLK4Q86YV6 388 aaPredicted RBP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 LRRC57Q8N9N7 239 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 EXT2Q93063 718 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 CCT7Q99832 543 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 HSD17B14Q9BPX1 270 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 NRDE2Q9H7Z3 1164 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 SP110Q9HB58 689 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 CHST7Q9NS84 486 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 STX18Q9P2W9 335 aaKnown RBP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 SEPT3Q9UH03 358 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 TOGARAM1Q9Y4F4 1720 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 HNRNPRO43390 633 aaKnown RBP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 NOL4O94818 638 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 SNUPNO95149 360 aaKnown RBP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 GH1P01241 217 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 MGAT5Q09328 741 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 CYTH1Q15438 398 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 GSTA3Q16772 222 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 ZNF484Q5JVG2 852 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 ARL10Q8N8L6 244 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 OR6P1Q8NGX9 317 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 AGAP11Q8TF27 550 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 ZNF384Q8TF68 577 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 ASPSCR1Q9BZE9 553 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 MAF1Q9H063 256 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 STN1Q9H668 368 aaKnown RBP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 ITGAVP06756 1048 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 HNRNPCP07910 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 GFAPP14136 432 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 RTP1P59025 263 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 PTPN11Q06124 597 aaPredicted RBP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 ENPEPQ07075 957 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 PPP3CAQ08209 521 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 FAM83EQ2M2I3 478 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 BTBD8Q5XKL5 378 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 POLNQ7Z5Q5 900 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 PHF13Q86YI8 300 aaPredicted RBP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 ATPAF2Q8N5M1 289 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 TMA16Q96EY4 203 aaKnown RBP10.9□□□□□ -0.66
RRP1B-202ENST00000470886 TRAPPC9Q96Q05 1148 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 BRD8Q9H0E9 1235 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 CATSPERBQ9H7T0 1116 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 SLC38A7Q9NVC3 462 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 VTI1BQ9UEU0 232 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 AP4S1Q9Y587 144 aa10.9□□□□□ -0.66
RRP1B-202ENST00000470886 DDX3YO15523 660 aaKnown RBP10.89□□□□□ -0.67
RRP1B-202ENST00000470886 LYPLA2O95372 231 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 F9P00740 461 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 CDH2P19022 906 aaPredicted RBP10.89□□□□□ -0.67
RRP1B-202ENST00000470886 SLC12A1Q13621 1099 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 PGM5Q15124 567 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 MFSD7Q6UXD7 560 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 IZUMO2Q6UXV1 221 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 SLFN11Q7Z7L1 901 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 NT5DC4Q86YG4 428 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 BRSK2Q8IWQ3 736 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 TLCD1Q96CP7 247 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 ATG4CQ96DT6 458 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 POP1Q99575 1024 aaKnown RBP10.89□□□□□ -0.67
RRP1B-202ENST00000470886 DNAJC16Q9Y2G8 782 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 SNED1Q8TER0 1413 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 SPDYE2BA6NHP3 402 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 SPDYE6P0CI01 402 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 ELK3P41970 407 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 MYL6P60660 151 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 LRRC36Q1X8D7 754 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 DNERQ8NFT8 737 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 NCLNQ969V3 563 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 TMEM176AQ96HP8 235 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 ZFRQ96KR1 1074 aaKnown RBP10.89□□□□□ -0.67
RRP1B-202ENST00000470886 CCDC28BQ9BUN5 200 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 MTMR12Q9C0I1 747 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 KIF9Q9HAQ2 790 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 RPS6KL1Q9Y6S9 549 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 HACD1B0YJ81 288 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 C2CD2LO14523 706 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 NEMP1O14524 444 aa10.89□□□□□ -0.67
RRP1B-202ENST00000470886 CHADO15335 359 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms