RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 CCDC66A2RUB6 948 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 H0YGN5 161 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 DDX3YO15523 660 aaKnown RBP9.13□□□□□ -0.95
HDLBP-233ENST00000470710 NCK2O43639 380 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 SPOPO43791 374 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 DAB1O75553 588 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 URI1O94763 535 aaPredicted RBP9.13□□□□□ -0.95
HDLBP-233ENST00000470710 ARHGEF15O94989 841 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 ZBED1O96006 694 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 ATF2P15336 505 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 PDGFRAP16234 1089 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 GPD1P21695 349 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 PSMA2P25787 234 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 CTNNA1P35221 906 aaKnown RBP9.13□□□□□ -0.95
HDLBP-233ENST00000470710 FLT3P36888 993 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 PTPN9P43378 593 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 TUFMP49411 452 aaKnown RBP9.13□□□□□ -0.95
HDLBP-233ENST00000470710 NDUFV1P49821 464 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 CDR1P51861 262 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 SLC5A3P53794 718 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 ERVK-21P61565 698 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 RPL10AP62906 217 aaKnown RBP9.13□□□□□ -0.95
HDLBP-233ENST00000470710 TAF5Q15542 800 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 LRRC38Q5VT99 294 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 FAM109BQ6ICB4 259 aaPredicted RBP9.13□□□□□ -0.95
HDLBP-233ENST00000470710 BEND5Q7L4P6 421 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 BHLHA9Q7RTU4 235 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 SCN4BQ8IWT1 228 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 NUP93Q8N1F7 819 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 UBL4BQ8N7F7 174 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 SPPL3Q8TCT6 385 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 CLEC4CQ8WTT0 213 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 RXFP2Q8WXD0 754 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 PGLYRP2Q96PD5 576 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 TGS1Q96RS0 853 aaKnown RBP9.13□□□□□ -0.95
HDLBP-233ENST00000470710 NCAPGQ9BPX3 1015 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 DDX23Q9BUQ8 820 aaKnown RBP9.13□□□□□ -0.95
HDLBP-233ENST00000470710 TRIM62Q9BVG3 475 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 CRISPLD1Q9H336 500 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 FBXO44Q9H4M3 255 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 NGRNQ9NPE2 291 aaKnown RBP9.13□□□□□ -0.95
HDLBP-233ENST00000470710 CDC23Q9UJX2 597 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 MRFAP1Q9Y605 127 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 SAR1BQ9Y6B6 198 aa9.13□□□□□ -0.95
HDLBP-233ENST00000470710 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 FAM92AA1XBS5 289 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 GRXCR1A8MXD5 290 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 FSCN2O14926 492 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 TEX28O15482 410 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 PSTPIP1O43586 416 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 GRAP2O75791 330 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 RTN3O95197 1032 aaPredicted RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 CXCL14O95715 111 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 C1RP00736 705 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 CA3P07451 260 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 USP17L7P0C7H9 530 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 MYOGP15173 224 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 DESP17661 470 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 DNAJB2P25686 324 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 SDC4P31431 198 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 BMP8BP34820 402 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 PCK1P35558 622 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 MATKP42679 507 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 GPR15P49685 360 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 PEX5P50542 639 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 RNASE9P60153 205 aaKnown RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 YWHAZP63104 245 aaKnown RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 DUSP4Q13115 394 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 SMC1AQ14683 1233 aaKnown RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 RAB30Q15771 203 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 DDR2Q16832 855 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 WHAMMP3Q1A5X7 153 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 MGAT5BQ3V5L5 792 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 CCDC14Q49A88 953 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 PDE12Q6L8Q7 609 aaKnown RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 TRNP1Q6NT89 227 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 TMC7Q7Z402 723 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 POLNQ7Z5Q5 900 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 TCEAL8Q8IYN2 117 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 TTC9BQ8N6N2 239 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 EMC1Q8N766 993 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 SCAMP5Q8TAC9 235 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 AUTS2Q8WXX7 1259 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 CENPIQ92674 756 aaPredicted RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 NT5C3BQ969T7 300 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 FAM149B1Q96BN6 582 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 PBKQ96KB5 322 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 OSBPL9Q96SU4 736 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 SEPT5Q99719 369 aaPredicted RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 C17orf80Q9BSJ5 609 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 EMILIN2Q9BXX0 1053 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 POPDC2Q9HBU9 364 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 TLR9Q9NR96 1032 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 RRN3Q9NYV6 651 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 RNF14Q9UBS8 474 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 PACSIN2Q9UNF0 486 aaPredicted RBP9.12□□□□□ -0.95
HDLBP-233ENST00000470710 SCML2Q9UQR0 700 aa9.12□□□□□ -0.95
HDLBP-233ENST00000470710 SLC27A5Q9Y2P5 690 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms