RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 ATP11AP98196 1134 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 CKAP4Q07065 602 aaKnown RBP8.74□□□□□ -1.01
GTF3A-206ENST00000470606 TRADDQ15628 312 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 CCDC181Q5TID7 509 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 SDHAF4Q5VUM1 108 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 SYPL2Q5VXT5 272 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 KATNAL2Q8IYT4 538 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 TMEM199Q8N511 208 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 UBL4BQ8N7F7 174 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 PRELID2Q8N945 189 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 MSANTD4Q8NCY6 345 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.74□□□□□ -1.01
GTF3A-206ENST00000470606 IGSF21Q96ID5 467 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 CNPY3Q9BT09 278 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 COLEC11Q9BWP8 271 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 PARD6BQ9BYG5 372 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 ULBP1Q9BZM6 244 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 DDX47Q9H0S4 455 aaKnown RBP8.74□□□□□ -1.01
GTF3A-206ENST00000470606 RNF14Q9UBS8 474 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 PCSK1NQ9UHG2 260 aa8.74□□□□□ -1.01
GTF3A-206ENST00000470606 PLXNA4Q9HCM2 1894 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 I6L893 689 aaPredicted RBP8.73□□□□□ -1.01
GTF3A-206ENST00000470606 DPYSL4O14531 572 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 TRAPPC3O43617 180 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 RARAP10276 462 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 RPL17P18621 184 aaKnown RBP8.73□□□□□ -1.01
GTF3A-206ENST00000470606 GPD1P21695 349 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 PAFAH1B1P43034 410 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 SSR1P43307 286 aaKnown RBP8.73□□□□□ -1.01
GTF3A-206ENST00000470606 DAOAP59103 153 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 SLC7A5Q01650 507 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 KLF1Q13351 362 aaPredicted RBP8.73□□□□□ -1.01
GTF3A-206ENST00000470606 CDO1Q16878 200 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 CTXN3Q4LDR2 81 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 TMEM240Q5SV17 173 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 FBXO38Q6PIJ6 1188 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 KCNT2Q6UVM3 1135 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 MFSD7Q6UXD7 560 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 BNIPLQ7Z465 357 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 SLC13A5Q86YT5 568 aaPredicted RBP8.73□□□□□ -1.01
GTF3A-206ENST00000470606 ZDHHC17Q8IUH5 632 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 RHOT1Q8IXI2 618 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 THEM5Q8N1Q8 247 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 CENPIQ92674 756 aaPredicted RBP8.73□□□□□ -1.01
GTF3A-206ENST00000470606 NT5C3BQ969T7 300 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 RNF25Q96BH1 459 aaPredicted RBP8.73□□□□□ -1.01
GTF3A-206ENST00000470606 KRT12Q99456 494 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 CHST7Q9NS84 486 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 ABI2Q9NYB9 513 aaPredicted RBP8.73□□□□□ -1.01
GTF3A-206ENST00000470606 R3HDM2Q9Y2K5 976 aaKnown RBP8.73□□□□□ -1.01
GTF3A-206ENST00000470606 USP3Q9Y6I4 520 aa8.73□□□□□ -1.01
GTF3A-206ENST00000470606 PLXNA3P51805 1871 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 KRIT1O00522 736 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 FSCN2O14926 492 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 SART1O43290 800 aaKnown RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 TRUB2O95900 331 aaKnown RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 GLI1P08151 1106 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 RALAP11233 206 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 KRT10P13645 584 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 SCNN1AP37088 669 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 ACADSBP45954 432 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 ALDH7A1P49419 539 aaKnown RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 USP46P62068 366 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 VSNL1P62760 191 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 TSPY1Q01534 308 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 DDR2Q16832 855 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 LONRF2Q1L5Z9 754 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 LRRC38Q5VT99 294 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 PM20D1Q6GTS8 502 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 TTC27Q6P3X3 843 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 RNF19BQ6ZMZ0 732 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 ARCQ7LC44 396 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 SPRED2Q7Z698 418 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 KLHL7Q8IXQ5 586 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 C7orf61Q8IZ16 206 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 DEFB106AQ8N104 65 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 SLC39A11Q8N1S5 342 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 GPR152Q8TDT2 470 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 RPGRIP1Q96KN7 1286 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 SLITRK1Q96PX8 696 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 TBCBQ99426 244 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 TTPALQ9BTX7 342 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 DDX23Q9BUQ8 820 aaKnown RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 HEMGNQ9BXL5 484 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 UBXN6Q9BZV1 441 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 ZWILCHQ9H900 591 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 LRRC4Q9HBW1 653 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 ANLNQ9NQW6 1124 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 TMPRSS4Q9NRS4 437 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 USP18Q9UMW8 372 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 NAALADL1Q9UQQ1 740 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 LCHNA4D1U4 455 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 RAD51CO43502 376 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 BAIAP3O94812 1187 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 GJB5O95377 273 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 MYBL2P10244 700 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 H2AFXP16104 143 aaPredicted RBP8.72□□□□□ -1.01
GTF3A-206ENST00000470606 PCK1P35558 622 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 MATKP42679 507 aa8.72□□□□□ -1.01
GTF3A-206ENST00000470606 CDKN2BP42772 138 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms