RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 ZNF77Q15935 545 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 NAIF1Q69YI7 327 aaPredicted RBP12.28□□□□□ -0.44
HLA-C-206ENST00000470363 TRAPPC11Q7Z392 1133 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 TMC6Q7Z403 805 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 WDR5BQ86VZ2 330 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 WDR49Q8IV35 697 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 DRC7Q8IY82 874 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 PARD3BQ8TEW8 1205 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 MRPS31Q92665 395 aaKnown RBP12.28□□□□□ -0.44
HLA-C-206ENST00000470363 EZH1Q92800 747 aaPredicted RBP12.28□□□□□ -0.44
HLA-C-206ENST00000470363 ANKRD36BP1Q96IX9 119 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 SPATA17Q96L03 361 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 CRACR2AQ9BSW2 395 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 KIAA1586Q9HCI6 787 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 UXTQ9UBK9 157 aaPredicted RBP12.28□□□□□ -0.44
HLA-C-206ENST00000470363 MAGED2Q9UNF1 606 aaPredicted RBP12.28□□□□□ -0.44
HLA-C-206ENST00000470363 DENND4CQ5VZ89 1909 aa12.27□□□□□ -0.44
HLA-C-206ENST00000470363 C2orf78A6NCI8 922 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 PRR5-ARHGAP8B1AHC4 643 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 LRP3O75074 770 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 TACC1O75410 805 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 DEKP35659 375 aaKnown RBP12.27□□□□□ -0.45
HLA-C-206ENST00000470363 GCLMP48507 274 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 GALK1P51570 392 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 USP46P62068 366 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 ARHGAP8P85298 464 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 KCNMA1Q12791 1236 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 MYO1EQ12965 1108 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 SIM2Q14190 667 aaPredicted RBP12.27□□□□□ -0.45
HLA-C-206ENST00000470363 PSMD6Q15008 389 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 SYCP1Q15431 976 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 LPAL2Q16609 132 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 CBWD6Q4V339 395 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 CBWD3Q5JTY5 395 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 CBWD5Q5RIA9 395 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 SPATA2LQ8IUW3 424 aaPredicted RBP12.27□□□□□ -0.45
HLA-C-206ENST00000470363 VSTM4Q8IW00 320 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 TMC2Q8TDI7 906 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 SECISBP2LQ93073 1101 aaKnown RBP12.27□□□□□ -0.45
HLA-C-206ENST00000470363 CEP295NLQ96MC4 621 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 SYT15Q9BQS2 421 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 MRPL45Q9BRJ2 306 aaKnown RBP12.27□□□□□ -0.45
HLA-C-206ENST00000470363 TTLL2Q9BWV7 592 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 XYLT2Q9H1B5 865 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 ECT2Q9H8V3 914 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 TMEM30AQ9NV96 361 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 CDH9Q9ULB4 789 aa12.27□□□□□ -0.45
HLA-C-206ENST00000470363 CCDC163A0A0D9SF12 145 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 STAU1O95793 577 aaKnown RBP12.26□□□□□ -0.45
HLA-C-206ENST00000470363 EGFP01133 1207 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 TPM3P06753 285 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 TNNI1P19237 187 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 GJA4P35212 333 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 PBX1P40424 430 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 FMO5P49326 533 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 PSMC1P62191 440 aaKnown RBP12.26□□□□□ -0.45
HLA-C-206ENST00000470363 CLDN10P78369 228 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 APBA1Q02410 837 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 LMNB2Q03252 620 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 SPEM2Q0P670 501 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 USP4Q13107 963 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 MTF1Q14872 753 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 PDGFRLQ15198 375 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 EML3Q32P44 896 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 FKBP15Q5T1M5 1219 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 VSTM1Q6UX27 236 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 MYCBPAPQ8TBZ2 947 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 OSCP1Q8WVF1 389 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 MYLPFQ96A32 169 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 PCED1BQ96HM7 432 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 PCMTD1Q96MG8 357 aaPredicted RBP12.26□□□□□ -0.45
HLA-C-206ENST00000470363 FNBP1Q96RU3 617 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 LINC00597Q9H2U6 94 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.26□□□□□ -0.45
HLA-C-206ENST00000470363 POLR3BQ9NW08 1133 aaPredicted RBP12.26□□□□□ -0.45
HLA-C-206ENST00000470363 GMEB2Q9UKD1 530 aa12.26□□□□□ -0.45
HLA-C-206ENST00000470363 OLFM2O95897 454 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 TNNC2P02585 160 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 PDGFRBP09619 1106 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 USP17L7P0C7H9 530 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 SDHBP21912 280 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 BDNFP23560 247 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 CDC25BP30305 580 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 GNL1P36915 607 aaPredicted RBP12.25□□□□□ -0.45
HLA-C-206ENST00000470363 RAP1GAPP47736 663 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 CACNA2D1P54289 1103 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 NOP14P78316 857 aaKnown RBP12.25□□□□□ -0.45
HLA-C-206ENST00000470363 GOLGA8FQ08AF8 430 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 GOLGA8DPQ0D2H9 430 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 GRSF1Q12849 480 aaKnown RBP eCLIP12.25□□□□□ -0.45
HLA-C-206ENST00000470363 CSRP2Q16527 193 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 GAB4Q2WGN9 574 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 HEATR6Q6AI08 1181 aaKnown RBP12.25□□□□□ -0.45
HLA-C-206ENST00000470363 C4orf50Q6ZRC1 276 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 SCN4BQ8IWT1 228 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 FAM160A2Q8N612 972 aaPredicted RBP12.25□□□□□ -0.45
HLA-C-206ENST00000470363 ARL14EPQ8N8R7 260 aaPredicted RBP12.25□□□□□ -0.45
HLA-C-206ENST00000470363 CPLX3Q8WVH0 158 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 ELMO3Q96BJ8 720 aa12.25□□□□□ -0.45
HLA-C-206ENST00000470363 PDLIM2Q96JY6 352 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms