RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 SLC35B4Q969S0 331 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 BTBD9Q96Q07 612 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 WDR83Q9BRX9 315 aaKnown RBP9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 C20orf27Q9GZN8 174 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 COPS7BQ9H9Q2 264 aaPredicted RBP9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 FAIMQ9NVQ4 179 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 TCRBV9S1A1TA0A576 114 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 GRIN3BO60391 1043 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 GAS7O60861 476 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 RBP3P10745 1247 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 CDH2P19022 906 aaPredicted RBP9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 HOXD12P35452 270 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 XIAPP98170 497 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 STX3Q13277 289 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 BTG3Q14201 252 aaPredicted RBP9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 KRT39Q6A163 491 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 IGDCC3Q8IVU1 814 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 PQLC1Q8N2U9 271 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 LARGE2Q8N3Y3 721 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 DDX1Q92499 740 aaKnown RBP9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 CPT1BQ92523 772 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 JADE3Q92613 823 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 PPP1R14BQ96C90 147 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 FAM81BQ96LP2 452 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 RBM38Q9H0Z9 239 aaKnown RBP9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 SEL1LQ9UBV2 794 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 RSL24D1Q9UHA3 163 aaKnown RBP9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 HERC5Q9UII4 1024 aaKnown RBP9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 GNEQ9Y223 722 aaKnown RBP9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 DNAJC16Q9Y2G8 782 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 LY75O60449 1722 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 PAPPAQ13219 1627 aa9.91□□□□□ -0.82
NHLRC3-203ENST00000470258 BTBD19C9JJ37 291 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 SLC26A4O43511 780 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 AVILO75366 819 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 TMEM63AO94886 807 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 COL6A2P12110 1019 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 PSMC5P62195 406 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 RPL7AP62424 266 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 SMAD1Q15797 465 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 SMTNL2Q2TAL5 461 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 TXNRD3NBQ6F5E7 133 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 TMEM53Q6P2H8 277 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 KRT27Q7Z3Y8 459 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 WDR75Q8IWA0 830 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 MARVELD2Q8N4S9 558 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 RNF169Q8NCN4 708 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 HELQQ8TDG4 1101 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 SLITRK1Q96PX8 696 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 ARMC7Q9H6L4 198 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 CAAP1Q9H8G2 361 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 PCDH9Q9HC56 1237 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 WRAP73Q9P2S5 460 aaPredicted RBP9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 TBX3O15119 743 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 CFLARO15519 480 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 SNHG28P0DPA3 235 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 PORP16435 677 aaPredicted RBP9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 ADRA2BP18089 450 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 RXRGP48443 463 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 NR1H2P55055 460 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 NFIL3Q16649 462 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 RTKN2Q8IZC4 609 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 PPP4R1Q8TF05 950 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 GFM2Q969S9 779 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 HSD17B14Q9BPX1 270 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 GLT8D2Q9H1C3 349 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 XAB2Q9HCS7 855 aaKnown RBP9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 SPATA7Q9P0W8 599 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 POLIQ9UNA4 740 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 TSC22D4Q9Y3Q8 395 aa9.9□□□□□ -0.82
NHLRC3-203ENST00000470258 SF3B1O75533 1304 aaKnown RBP eCLIP9.9□□□□□ -0.839e-6■■■■■ 68.9
NHLRC3-203ENST00000470258 SLC16A4O15374 487 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 P4HA2O15460 535 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 DSG3P32926 999 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 HALP42357 657 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 GSTM4Q03013 218 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 AP3B2Q13367 1082 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 ATP1A4Q13733 1029 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 TBCCQ15814 346 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 SLC15A2Q16348 729 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 SNRNP35Q16560 246 aaKnown RBP9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 NRF1Q16656 503 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 VWA5B1Q5TIE3 1220 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 FAM91A1Q658Y4 838 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 DCUN1D2Q6PH85 259 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 SPOCD1Q6ZMY3 1216 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 NDUFAF2Q8N183 169 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 LRRC43Q8N309 656 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 FBXL13Q8NEE6 735 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 ACTL9Q8TC94 416 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 C7orf26Q96N11 449 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 ACCSQ96QU6 501 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 NACC1Q96RE7 527 aa9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 PAIP1Q9H074 479 aaKnown RBP9.9□□□□□ -0.83
NHLRC3-203ENST00000470258 MAST2Q6P0Q8 1798 aa9.89□□□□□ -0.83
NHLRC3-203ENST00000470258 TMEM247A6NEH6 219 aa9.89□□□□□ -0.83
NHLRC3-203ENST00000470258 E9PBE3 544 aa9.89□□□□□ -0.83
NHLRC3-203ENST00000470258 F8VP50 259 aa9.89□□□□□ -0.83
NHLRC3-203ENST00000470258 NOP56O00567 594 aaKnown RBP9.89□□□□□ -0.83
NHLRC3-203ENST00000470258 AIM2O14862 343 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms