RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 FAM171BQ6P995 826 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 SLC41A1Q8IVJ1 513 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 KIAA1958Q8N8K9 716 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 FAM84AQ96KN4 292 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 FIZ1Q96SL8 496 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 RBAKQ9NYW8 714 aaPredicted RBP20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 DEC1Q9P2X7 70 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 ITGA11Q9UKX5 1188 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 IGHV1OR15-9A0A0B4J2B8 117 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 GABRDO14764 452 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 TRIM66O15016 1216 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 ZNF217O75362 1048 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 APC2O95996 2303 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 TMEM191BP0C7N4 346 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 LMO2P25791 158 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 ADSSP30520 456 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 MYO1EQ12965 1108 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 MAPRE1Q15691 268 aaKnown RBP20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 SOWAHAQ2M3V2 549 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 ANO4Q32M45 955 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 TDRD10Q5VZ19 366 aaKnown RBP20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 KRI1Q8N9T8 703 aaKnown RBP20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 SETD7Q8WTS6 366 aaKnown RBP20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 RAD54LQ92698 747 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 ZSCAN31Q96LW9 406 aaPredicted RBP20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 FAM124BQ9H5Z6 455 aaPredicted RBP20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 BLOC1S4Q9NUP1 217 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 SUSD2Q9UGT4 822 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 CDH9Q9ULB4 789 aa20.23■□□□□ 0.83
NCKIPSD-209ENST00000470006 SLC26A4O43511 780 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 CHRM1P11229 460 aaPredicted RBP20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 NTSR1P30989 418 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 TAF10Q12962 218 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 ARL6IP4Q66PJ3 421 aaKnown RBP20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 SCARA3Q6AZY7 606 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 HS2ST1Q7LGA3 356 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 BRSK2Q8IWQ3 736 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 KCNV2Q8TDN2 545 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 AK8Q96MA6 479 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 BBC3Q96PG8 261 aaPredicted RBP20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 SLITRK1Q96PX8 696 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 EXOC7Q9UPT5 735 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 SH3BP1Q9Y3L3 701 aa20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 URB1O60287 2271 aaKnown RBP20.22■□□□□ 0.83
NCKIPSD-209ENST00000470006 GOLGA8IPA6NC78 632 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 GOLGA8JA6NMD2 632 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 F8VP50 259 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 TULP3O75386 442 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 TOGARAM2Q6ZUX3 1019 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 ZNF720Q7Z2F6 126 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 SFR1Q86XK3 245 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 ZSWIM2Q8NEG5 633 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 CEP295NLQ96MC4 621 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 MMS19Q96T76 1030 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 MTMR12Q9C0I1 747 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 ST6GALNAC4Q9H4F1 302 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 MRPL44Q9H9J2 332 aaKnown RBP20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 CRTAC1Q9NQ79 661 aa20.21■□□□□ 0.83
NCKIPSD-209ENST00000470006 CELSR3Q9NYQ7 3312 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 BPTFQ12830 3046 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 LDHAP00338 332 aaKnown RBP20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 OAS1P00973 400 aaKnown RBP20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 NDUFV2P19404 249 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 MAOBP27338 520 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 WDR45BQ5MNZ6 344 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 DYMQ7RTS9 669 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 SLCO6A1Q86UG4 719 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 CHPFQ8IZ52 775 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 SYCP3Q8IZU3 236 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 LARP4BQ92615 738 aaKnown RBP20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 HVCN1Q96D96 273 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 HPDLQ96IR7 371 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 ANKRD36BP1Q96IX9 119 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 ACCSQ96QU6 501 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 TTLL2Q9BWV7 592 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 TBC1D7Q9P0N9 293 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 ASXL3Q9C0F0 2248 aa20.2■□□□□ 0.82
NCKIPSD-209ENST00000470006 PTPRBP23467 1997 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 HELZ2Q9BYK8 2649 aaKnown RBP20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 E2F8A0AVK6 867 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 GJB3O75712 270 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 OLFM2O95897 454 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 NOP14P78316 857 aaKnown RBP20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 GRIK2Q13002 908 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 MDH1BQ5I0G3 518 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 KIAA1324Q6UXG2 1013 aaKnown RBP20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 DPH6Q7L8W6 267 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 PHTF2Q8N3S3 785 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 TERB1Q8NA31 727 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 IPO4Q8TEX9 1081 aaKnown RBP20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 FOXJ1Q92949 421 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 OTUB2Q96DC9 234 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 PCED1BQ96HM7 432 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 PDE11AQ9HCR9 933 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 SIX4Q9UIU6 781 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
NCKIPSD-209ENST00000470006 A0A1W2PQF6 199 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 GOLGA8CPA6NN73 597 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 MEI4A8MW99 385 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 DDIT3P35638 169 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms