RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SMPD1P17405 629 aa15.33■□□□□ 0.04
CBWD3-205ENST00000469687 EPHX2P34913 555 aa15.33■□□□□ 0.04
CBWD3-205ENST00000469687 KCNJ2P63252 427 aa15.33■□□□□ 0.04
CBWD3-205ENST00000469687 PWP2Q15269 919 aaKnown RBP15.33■□□□□ 0.04
CBWD3-205ENST00000469687 AGGF1Q8N302 714 aaeCLIP15.33■□□□□ 0.04
CBWD3-205ENST00000469687 CCDC63Q8NA47 563 aa15.33■□□□□ 0.04
CBWD3-205ENST00000469687 KHSRPQ92945 711 aaKnown RBP eCLIP15.33■□□□□ 0.04
CBWD3-205ENST00000469687 C18orf25Q96B23 403 aaPredicted RBP15.33■□□□□ 0.04
CBWD3-205ENST00000469687 FAM49AQ9H0Q0 323 aaPredicted RBP15.33■□□□□ 0.04
CBWD3-205ENST00000469687 ECT2Q9H8V3 914 aa15.33■□□□□ 0.04
CBWD3-205ENST00000469687 SETD4Q9NVD3 440 aa15.33■□□□□ 0.04
CBWD3-205ENST00000469687 PDHXO00330 501 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 PRPSAP2O60256 369 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 YBX3P16989 372 aaKnown RBP eCLIP15.32■□□□□ 0.04
CBWD3-205ENST00000469687 HOXA11P31270 313 aaPredicted RBP15.32■□□□□ 0.04
CBWD3-205ENST00000469687 ELK3P41970 407 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 PKDCCQ504Y2 493 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 OLFML1Q6UWY5 402 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 PALM2Q8IXS6 379 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 MZB1Q8WU39 189 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 EMID1Q96A84 441 aaPredicted RBP15.32■□□□□ 0.04
CBWD3-205ENST00000469687 MAGEB5Q9BZ81 275 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 DPEP3Q9H4B8 488 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 ACSS3Q9H6R3 686 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 COL1A2P08123 1366 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 RALGAPA2Q2PPJ7 1873 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 RBM47A0AV96 593 aaKnown RBP15.32■□□□□ 0.04
CBWD3-205ENST00000469687 H7C0C1 242 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 MMP3P08254 477 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 GRM5P41594 1212 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 ATP5OP48047 213 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 ATXN1P54253 815 aaKnown RBP15.32■□□□□ 0.04
CBWD3-205ENST00000469687 BNIP1Q12981 228 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 SPARCL1Q14515 664 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 KRT81Q14533 505 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 LDLRAD1Q5T700 205 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 FAXCQ5TGI0 409 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 ADGRD1Q6QNK2 874 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 PDIK1LQ8N165 341 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 KIF2BQ8N4N8 673 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 PQLC3Q8N755 202 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 PLD5Q8N7P1 536 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 CLEC4CQ8WTT0 213 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 FAM172AQ8WUF8 416 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 DCAKDQ8WVC6 231 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 SLC10A4Q96EP9 437 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 RNF157Q96PX1 679 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 DHRS4Q9BTZ2 278 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 MIS12Q9H081 205 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 ZNF408Q9H9D4 720 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 PHTF1Q9UMS5 762 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 TRIM33Q9UPN9 1127 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 SMG5Q9UPR3 1016 aaKnown RBP15.32■□□□□ 0.04
CBWD3-205ENST00000469687 HEY1Q9Y5J3 304 aa15.32■□□□□ 0.04
CBWD3-205ENST00000469687 TRIP12Q14669 1992 aaPredicted RBP15.32■□□□□ 0.04
CBWD3-205ENST00000469687 DOCK3Q8IZD9 2030 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 NDC80O14777 642 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 PAPSS1O43252 624 aaPredicted RBP15.31■□□□□ 0.04
CBWD3-205ENST00000469687 MGRN1O60291 552 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 STAU1O95793 577 aaKnown RBP15.31■□□□□ 0.04
CBWD3-205ENST00000469687 PHBP35232 272 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 RNASELQ05823 741 aaKnown RBP15.31■□□□□ 0.04
CBWD3-205ENST00000469687 KCNJ11Q14654 390 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 SNCBQ16143 134 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 PDK4Q16654 411 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 SMYD5Q6GMV2 418 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 LVRNQ6Q4G3 990 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 CCDC33Q8N5R6 958 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 USP29Q9HBJ7 922 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 RXFP1Q9HBX9 757 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 KLHL14Q9P2G3 628 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 ZNF638Q14966 1978 aaKnown RBP15.31■□□□□ 0.04
CBWD3-205ENST00000469687 KBTBD13C9JR72 458 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 ADRA1DP25100 572 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 RASA2Q15283 850 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 KYAT1Q16773 422 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 USP50Q70EL3 339 aaPredicted RBP15.31■□□□□ 0.04
CBWD3-205ENST00000469687 PCDH19Q8TAB3 1148 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.31■□□□□ 0.04
CBWD3-205ENST00000469687 SLC35F5Q8WV83 523 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 SNRNP25Q9BV90 132 aaKnown RBP15.31■□□□□ 0.04
CBWD3-205ENST00000469687 PHACTR1Q9C0D0 580 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 SENP1Q9P0U3 644 aa15.31■□□□□ 0.04
CBWD3-205ENST00000469687 WDR91A4D1P6 747 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 KCNN4O15554 427 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 RBL1P28749 1068 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 SLC18A1P54219 525 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 CCNA1P78396 465 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 RNF43Q68DV7 783 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 PNMA8AQ86V59 439 aaPredicted RBP15.3■□□□□ 0.04
CBWD3-205ENST00000469687 FAF2Q96CS3 445 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 OSMRQ99650 979 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 APOL6Q9BWW8 343 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 ADAMTS10Q9H324 1103 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 NXF3Q9H4D5 531 aaKnown RBP15.3■□□□□ 0.04
CBWD3-205ENST00000469687 PCDH18Q9HCL0 1135 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 RAB6BQ9NRW1 208 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 SLC17A7Q9P2U7 560 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 PDCD11Q14690 1871 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms