RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 DEC1Q9P2X7 70 aa13.47□□□□□ -0.25
GAPVD1-214ENST00000469528 OBSL1O75147 1896 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 UBE4BO95155 1302 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 SPTLC2O15270 562 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 SLC6A11P48066 632 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 NASPP49321 788 aaPredicted RBP13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 TUBP50607 506 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 ATXN3P54252 364 aaPredicted RBP13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 CYP24A1Q07973 514 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 UAP1L1Q3KQV9 507 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 TRIM61Q5EBN2 209 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 FAM26FQ5R3K3 315 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 SNX30Q5VWJ9 437 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 FAM173BQ6P4H8 233 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 TMEM92Q6UXU6 159 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 LINC00301Q8NCQ3 95 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 C7orf25Q9BPX7 421 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 MED10Q9BTT4 135 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 FGFBP2Q9BYJ0 223 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 DNAI2Q9GZS0 605 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 FBXO44Q9H4M3 255 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 AGPAT3Q9NRZ7 376 aa13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 NXF1Q9UBU9 619 aaKnown RBP13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 CHORDC1Q9UHD1 332 aaPredicted RBP13.46□□□□□ -0.25
GAPVD1-214ENST00000469528 PTPRJQ12913 1337 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 ANAPC1Q9H1A4 1944 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 MAP1BP46821 2468 aaKnown RBP13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 A0A087X0B3 334 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 PVALEFA0A1B0GWK0 134 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 CDX4O14627 284 aaPredicted RBP13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 STX6O43752 255 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 EXOC3O60645 756 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 ZNF217O75362 1048 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 CLSTN1O94985 981 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 KIR2DL1P43626 348 aaPredicted RBP13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 CYP2J2P51589 502 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 GOLGA8FQ08AF8 430 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 GOLGA8DPQ0D2H9 430 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 ZNF252P-AS1Q0IIN9 211 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 IFRD2Q12894 506 aaPredicted RBP13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 FOXC1Q12948 553 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 CCDC142Q17RM4 750 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 DUOXA1Q1HG43 343 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 LY6G5CQ5SRR4 150 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 SLC23A3Q6PIS1 610 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 UNC13DQ70J99 1090 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 EPM2AIP1Q7L775 607 aaPredicted RBP13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 TMEFF1Q8IYR6 380 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 HDDC3Q8N4P3 179 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 DHX58Q96C10 678 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 XPO6Q96QU8 1125 aaKnown RBP13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 B3GNT5Q9BYG0 378 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 EML5Q05BV3 1969 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 THADAQ6YHU6 1953 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 ABCA7Q8IZY2 2146 aa13.45□□□□□ -0.26
GAPVD1-214ENST00000469528 LAMA1P25391 3075 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 SGK1O00141 431 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 CLIC2O15247 247 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 TGFB1I1O43294 461 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 CUTAO60888 179 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 BCKDHBP21953 392 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 MYL6P60660 151 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 GFPT1Q06210 699 aaPredicted RBP13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 BIRC3Q13489 604 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 HNRNPDQ14103 355 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 E2F5Q15329 346 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 KNOP1Q1ED39 458 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 SGSM1Q2NKQ1 1148 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 GAB4Q2WGN9 574 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 ANO4Q32M45 955 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 ZNF667Q5HYK9 610 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 LYSMD4Q5XG99 296 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 UNQ6494/PRO21346Q6UXR6 183 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 C12orf56Q8IXR9 622 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 ZNF513Q8N8E2 541 aaPredicted RBP13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 KDF1Q8NAX2 398 aaPredicted RBP13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 HMGB4Q8WW32 186 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 RLN3Q8WXF3 142 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 SMARCD1Q96GM5 515 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 FAM84AQ96KN4 292 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 ZNF518BQ9C0D4 1074 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 VRTNQ9H8Y1 702 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 DMAP1Q9NPF5 467 aaPredicted RBP13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.44□□□□□ -0.264e-8■■■■■ 65.2
GAPVD1-214ENST00000469528 TLR8Q9NR97 1041 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 SPHK2Q9NRA0 654 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 WDR35Q9P2L0 1181 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 TFIP11Q9UBB9 837 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 SLC6A14Q9UN76 642 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 STARD13Q9Y3M8 1113 aa13.44□□□□□ -0.26
GAPVD1-214ENST00000469528 TCRBV21S2A2A0A5A6 115 aa13.43□□□□□ -0.26
GAPVD1-214ENST00000469528 UPK3BL1B0FP48 263 aa13.43□□□□□ -0.26
GAPVD1-214ENST00000469528 UPK3BL2E5RIL1 263 aa13.43□□□□□ -0.26
GAPVD1-214ENST00000469528 GIPC1O14908 333 aa13.43□□□□□ -0.26
GAPVD1-214ENST00000469528 HOXC11O43248 304 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-214ENST00000469528 COCHO43405 550 aa13.43□□□□□ -0.26
GAPVD1-214ENST00000469528 RPN1P04843 607 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms