RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 FRYQ5TBA9 3013 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 HELZP42694 1942 aaKnown RBP13.05□□□□□ -0.32
HDAC3-204ENST00000469207 C1QTNF9BB2RNN3 333 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 KHNYNO15037 678 aaKnown RBP13.04□□□□□ -0.32
HDAC3-204ENST00000469207 EIF3DO15371 548 aaKnown RBP eCLIP13.04□□□□□ -0.32
HDAC3-204ENST00000469207 ADAM23O75077 832 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 BEST1O76090 585 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 C1QTNF9P0C862 333 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 YWHAQP27348 245 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 PTGER3P43115 390 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 KIR2DL1P43626 348 aaPredicted RBP13.04□□□□□ -0.32
HDAC3-204ENST00000469207 AFMP43652 599 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 PDE6CP51160 858 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 TNNC1P63316 161 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 MRPS21P82921 87 aaKnown RBP13.04□□□□□ -0.32
HDAC3-204ENST00000469207 EHHADHQ08426 723 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 TRPC3Q13507 836 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 CUL4BQ13620 913 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 UAP1L1Q3KQV9 507 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 SH3PXD2AQ5TCZ1 1133 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 GRAMD1CQ8IYS0 662 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 PHTF2Q8N3S3 785 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 B3GALNT2Q8NCR0 500 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 OLIG1Q8TAK6 271 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 ZFRQ96KR1 1074 aaKnown RBP13.04□□□□□ -0.32
HDAC3-204ENST00000469207 FSCN3Q9NQT6 498 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 MBD1Q9UIS9 605 aaPredicted RBP13.04□□□□□ -0.32
HDAC3-204ENST00000469207 HCN2Q9UL51 889 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 NUP205Q92621 2012 aa13.04□□□□□ -0.32
HDAC3-204ENST00000469207 A0A0A0MRY4 1105 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 TNFRSF10BO14763 440 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 POLR2DO15514 142 aaKnown RBP13.03□□□□□ -0.32
HDAC3-204ENST00000469207 PHACTR2O75167 634 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 PPP6R2O75170 966 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 TBX18O95935 607 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 APODP05090 189 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 IRF1P10914 325 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 ADH5P11766 374 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 PFKLP17858 780 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 WASP42768 502 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 PPP3CCP48454 512 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 SHC2P98077 582 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 AMPD3Q01432 767 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 FOXC1Q12948 553 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 UNC13DQ70J99 1090 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 CYP2U1Q7Z449 544 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 TMEM25Q86YD3 366 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 BBS7Q8IWZ6 715 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 PGBD3Q8N328 593 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 IQUBQ8NA54 791 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 HMGB4Q8WW32 186 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 INTS4Q96HW7 963 aaKnown RBP13.03□□□□□ -0.32
HDAC3-204ENST00000469207 CEP295NLQ96MC4 621 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 SLITRK1Q96PX8 696 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 MED10Q9BTT4 135 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 LRRC27Q9C0I9 530 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 ELOVL4Q9GZR5 314 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDAC3-204ENST00000469207 ARHGEF4Q9NR80 690 aa13.03□□□□□ -0.32
HDAC3-204ENST00000469207 USP24Q9UPU5 2620 aa13.02□□□□□ -0.32
HDAC3-204ENST00000469207 TBC1D3BA6NDS4 549 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 SLC9A3R1O14745 358 aaPredicted RBP13.02□□□□□ -0.33
HDAC3-204ENST00000469207 MAP3K13O43283 966 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 EXOC3O60645 756 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 CUTAO60888 179 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 VNN1O95497 513 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 C4BPAP04003 597 aaKnown RBP13.02□□□□□ -0.33
HDAC3-204ENST00000469207 FAM163BP0C2L3 166 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 CCDC130P13994 396 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 P2RY2P41231 377 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 DLG4P78352 724 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 ANO4Q32M45 955 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 MAP7D1Q3KQU3 841 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 ACOT1Q86TX2 421 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 FAM35AQ86V20 835 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 MIB1Q86YT6 1006 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 ZMIZ2Q8NF64 920 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 TMEM9BQ9NQ34 198 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 EHD2Q9NZN4 543 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 GMIPQ9P107 970 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 BCCIPQ9P287 314 aaKnown RBP eCLIP13.02□□□□□ -0.33
HDAC3-204ENST00000469207 ATXN2Q99700 1313 aaKnown RBP13.02□□□□□ -0.33
HDAC3-204ENST00000469207 GON4LQ3T8J9 2241 aa13.02□□□□□ -0.33
HDAC3-204ENST00000469207 ASPMQ8IZT6 3477 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 TCRBV21S2A2A0A5A6 115 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 LRRIQ3A6PVS8 624 aaPredicted RBP13.01□□□□□ -0.33
HDAC3-204ENST00000469207 CLSTN1O94985 981 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 GRIA2P42262 883 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 MAPK8P45983 427 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 SLC5A3P53794 718 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 GAD2Q05329 585 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 ZNF252P-AS1Q0IIN9 211 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 BIRC3Q13489 604 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 KNOP1Q1ED39 458 aaKnown RBP13.01□□□□□ -0.33
HDAC3-204ENST00000469207 TRIM61Q5EBN2 209 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 HECTD3Q5T447 861 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 DAB2IPQ5VWQ8 1189 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 CNNM4Q6P4Q7 775 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms