RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 CYP2J2P51589 502 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.33
COL5A1-207ENST00000469093 TNNC1P63316 161 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 ASIC1P78348 528 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 EHHADHQ08426 723 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 IFRD2Q12894 506 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-207ENST00000469093 TRPC3Q13507 836 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 STK38Q15208 465 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 HSF5Q4G112 596 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-207ENST00000469093 FAM26FQ5R3K3 315 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 LY6G5CQ5SRR4 150 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 PHTF2Q8N3S3 785 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 XXYLT1Q8NBI6 393 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 SCAMP5Q8TAC9 235 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 ZFRQ96KR1 1074 aaKnown RBP13.02□□□□□ -0.33
COL5A1-207ENST00000469093 C7orf25Q9BPX7 421 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 CUEDC2Q9H467 287 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 TMEM9BQ9NQ34 198 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 ARHGEF4Q9NR80 690 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 TMEM74BQ9NUR3 256 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 NXF1Q9UBU9 619 aaKnown RBP13.02□□□□□ -0.33
COL5A1-207ENST00000469093 MBD1Q9UIS9 605 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-207ENST00000469093 WASF3Q9UPY6 502 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 CACNA1EQ15878 2313 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 CFAP47Q6ZTR5 3102 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 C1QTNF9BB2RNN3 333 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 TNFRSF10BO14763 440 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 MAP3K13O43283 966 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 STX6O43752 255 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 PPP6R2O75170 966 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 RTN3O95197 1032 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-207ENST00000469093 C1QTNF9P0C862 333 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 ADH5P11766 374 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 CSRP1P21291 193 aaKnown RBP13.01□□□□□ -0.33
COL5A1-207ENST00000469093 ATICP31939 592 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 PTGER3P43115 390 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 CDH8P55286 799 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 GAD2Q05329 585 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 MAP7D1Q3KQU3 841 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 EOGTQ5NDL2 527 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 HECTD3Q5T447 861 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 SNX30Q5VWJ9 437 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 SHC4Q6S5L8 630 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 LPCAT2Q7L5N7 544 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 DDX42Q86XP3 938 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL5A1-207ENST00000469093 NELFCDQ8IXH7 590 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 TMEFF1Q8IYR6 380 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 IQUBQ8NA54 791 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 PDZD8Q8NEN9 1154 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 WHAMMQ8TF30 809 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 FBXO32Q969P5 355 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 POLMQ9NP87 494 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-207ENST00000469093 ZDHHC4Q9NPG8 344 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 FOXD4L1Q9NU39 408 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 IL37Q9NZH6 218 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 EVLQ9UI08 416 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-207ENST00000469093 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-207ENST00000469093 PTPRDP23468 1912 aa13.01□□□□□ -0.33
COL5A1-207ENST00000469093 PI4KAP42356 2102 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 TBC1D3BA6NDS4 549 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13□□□□□ -0.33
COL5A1-207ENST00000469093 TOP3BO95985 862 aaKnown RBP13□□□□□ -0.33
COL5A1-207ENST00000469093 CASP1P29466 404 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 CASP4P49662 377 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 ZNF252P-AS1Q0IIN9 211 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 FOXC1Q12948 553 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 UAP1L1Q3KQV9 507 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 TRIM61Q5EBN2 209 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 UNC13DQ70J99 1090 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 TMEM25Q86YD3 366 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 ETFBKMTQ8IXQ9 262 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 NAT16Q8N8M0 369 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 PLEKHO2Q8TD55 490 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 KCNV2Q8TDN2 545 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 HMGB4Q8WW32 186 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 OVCA2Q8WZ82 227 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 WBP2Q969T9 261 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 SYAP1Q96A49 352 aaPredicted RBP13□□□□□ -0.33
COL5A1-207ENST00000469093 OTUB2Q96DC9 234 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 SMYD3Q9H7B4 428 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 CCSER2Q9H7U1 834 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 VRTNQ9H8Y1 702 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 HCN2Q9UL51 889 aa13□□□□□ -0.33
COL5A1-207ENST00000469093 LAMA1P25391 3075 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 TCRBV21S2A2A0A5A6 115 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 FAM92AA1XBS5 289 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 HOXC11O43248 304 aaPredicted RBP12.99□□□□□ -0.33
COL5A1-207ENST00000469093 CUTAO60888 179 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 PHACTR2O75167 634 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 TULP3O75386 442 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 ZDHHC11BP0C7U3 371 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 SPINK2P20155 84 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 PGFP49763 221 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 TUBP50607 506 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 KDSRQ06136 332 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 LMAN2Q12907 356 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms