RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 RPL34P49207 117 aaKnown RBP12.58□□□□□ -0.4
VPS13D-204ENST00000469054 RGS7P49802 495 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 HTR4Q13639 388 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 TAF3Q5VWG9 929 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 PM20D1Q6GTS8 502 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 TANGO2Q6ICL3 276 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 MTSS1LQ765P7 747 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 CCDC186Q7Z3E2 898 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 NOP9Q86U38 636 aaKnown RBP12.58□□□□□ -0.4
VPS13D-204ENST00000469054 ZNF677Q86XU0 584 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 PASD1Q8IV76 773 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 FMNL3Q8IVF7 1028 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 ARID3BQ8IVW6 561 aaPredicted RBP12.58□□□□□ -0.4
VPS13D-204ENST00000469054 CMTM8Q8IZV2 173 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 WDTC1Q8N5D0 677 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 ST13P5Q8NFI4 369 aaPredicted RBP12.58□□□□□ -0.4
VPS13D-204ENST00000469054 EPS8L1Q8TE68 723 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 STK32AQ8WU08 396 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 DDX1Q92499 740 aaKnown RBP12.58□□□□□ -0.4
VPS13D-204ENST00000469054 BAP1Q92560 729 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 FGF14Q92915 247 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 IQCDQ96DY2 449 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 NOTCH4Q99466 2003 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 RPP25Q9BUL9 199 aaKnown RBP12.58□□□□□ -0.4
VPS13D-204ENST00000469054 PDCL3Q9H2J4 239 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 TRPV4Q9HBA0 871 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 ZFP14Q9HCL3 533 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 TRPC7Q9HCX4 862 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 CNGB3Q9NQW8 809 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 TLR8Q9NR97 1041 aaKnown RBP12.58□□□□□ -0.4
VPS13D-204ENST00000469054 ST7Q9NRC1 585 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 NUMBLQ9Y6R0 609 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 ITIH6Q6UXX5 1313 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 C2orf16Q68DN1 1984 aa12.58□□□□□ -0.4
VPS13D-204ENST00000469054 UNC80Q8N2C7 3258 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 DOCK6Q96HP0 2047 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 TRAV19A0A0A6YYK7 116 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 A0A1W2PQJ5 194 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 ECI2O75521 394 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 GABBR2O75899 941 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 ZBED1O96006 694 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 OAS1P00973 400 aaKnown RBP12.57□□□□□ -0.4
VPS13D-204ENST00000469054 USP17L7P0C7H9 530 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 LCP1P13796 627 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 FERP16591 822 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 HDCP19113 662 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 FCARP24071 287 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 AVPR1AP37288 418 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 ACADSBP45954 432 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 PGFP49763 221 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 PSEN1P49768 467 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 TUBP50607 506 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 CDR2Q01850 454 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 ARID5AQ03989 594 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 ADIGQ0VDE8 80 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 HECTD3Q5T447 861 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 GPIHBP1Q8IV16 184 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 SIX6OS1Q8N1H7 587 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 SCML4Q8N228 414 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 ARL14EPQ8N8R7 260 aaPredicted RBP12.57□□□□□ -0.4
VPS13D-204ENST00000469054 TMEM35BQ8NCS4 154 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 RSAD2Q8WXG1 361 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 E2F7Q96AV8 911 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 ELSPBP1Q96BH3 223 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 NOX5Q96PH1 765 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 CYP2S1Q96SQ9 504 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
VPS13D-204ENST00000469054 SLC4A5Q9BY07 1137 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 ULBP1Q9BZM6 244 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 CYTH4Q9UIA0 394 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 NOCTQ9UK39 431 aaKnown RBP12.57□□□□□ -0.4
VPS13D-204ENST00000469054 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
VPS13D-204ENST00000469054 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.57□□□□□ -0.4
VPS13D-204ENST00000469054 PTPRDP23468 1912 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 TCF20Q9UGU0 1960 aaKnown RBP12.56□□□□□ -0.4
VPS13D-204ENST00000469054 A0A1W2PQH9 124 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 PIK3R2O00459 728 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 AP5Z1O43299 807 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 FBXO21O94952 628 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 MMEP08473 750 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 CDH5P33151 784 aaPredicted RBP12.56□□□□□ -0.4
VPS13D-204ENST00000469054 VIPR2P41587 438 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 PDCLQ13371 301 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 TDGQ13569 410 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 SFMBT2Q5VUG0 894 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 IRF2BP2Q7Z5L9 587 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 SCD5Q86SK9 330 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 TMEM110Q86TL2 294 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 VSTM4Q8IW00 320 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 ARHGAP18Q8N392 663 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 SLC44A3Q8N4M1 653 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 C1orf131Q8NDD1 294 aaKnown RBP12.56□□□□□ -0.4
VPS13D-204ENST00000469054 SLC20A1Q8WUM9 679 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 CPLX3Q8WVH0 158 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
VPS13D-204ENST00000469054 PPP1R13BQ96KQ4 1090 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
VPS13D-204ENST00000469054 KXD1Q9BQD3 176 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms