RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 STAT2P52630 851 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 THOP1P52888 689 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 TPD52P55327 224 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 RPS3AP61247 264 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 POU5F1Q01860 360 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 KLRC3Q07444 240 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PCDH1Q08174 1060 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 DMPKQ09013 629 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 MAPK7Q13164 816 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 TRPC3Q13507 836 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 SLC29A2Q14542 456 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 NR1D2Q14995 579 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PDK3Q15120 406 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF827Q17R98 1081 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 C15orf59Q2T9L4 293 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 BRDTQ58F21 947 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ACSBG2Q5FVE4 666 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 AKAP4Q5JQC9 854 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 C6orf10Q5SRN2 563 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CCNJQ5T5M9 372 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 NDUFAF5Q5TEU4 345 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 SLX4IPQ5VYV7 408 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 TTI2Q6NXR4 508 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ZFP1Q6P2D0 407 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 TTC27Q6P3X3 843 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 RBM44Q6ZP01 1051 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 EPM2AIP1Q7L775 607 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PEX26Q7Z412 305 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CLNKQ7Z7G1 428 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PCGF5Q86SE9 256 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 DTX1Q86Y01 620 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 IRF2BP1Q8IU81 584 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ATP6V0D2Q8N8Y2 350 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 FAM133AQ8N9E0 248 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 RBM15BQ8NDT2 890 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 SUPT20HQ8NEM7 779 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 OR7G1Q8NGA0 311 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 OR2W6PQ8NHA6 318 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CEP70Q8NHQ1 597 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 GRK7Q8WTQ7 553 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 FAM172AQ8WUF8 416 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 DPF3Q92784 378 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 SLCO2A1Q92959 643 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 HPS3Q969F9 1004 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 NMD3Q96D46 503 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 RMDN1Q96DB5 314 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 MTMR8Q96EF0 704 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 DYDC2Q96IM9 177 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CNDP2Q96KP4 475 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CNOT6LQ96LI5 555 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 AK8Q96MA6 479 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 NLRP4Q96MN2 994 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PSD2Q9BQI7 771 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 SLC39A3Q9BRY0 314 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 METTL22Q9BUU2 404 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 RNF26Q9BY78 433 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 BHLHE41Q9C0J9 482 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.07□□□□□ -1.62e-7■■□□□ 12.4
SF3B1-207ENST00000468925 CCDC113Q9H0I3 377 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CCDC8Q9H0W5 538 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 RPAP3Q9H6T3 665 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 C12orf10Q9HB07 376 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 EPB41L4AQ9HCS5 686 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 KCNK9Q9NPC2 374 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CNGB3Q9NQW8 809 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CHST12Q9NRB3 414 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 KRT82Q9NSB4 513 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PAG1Q9NWQ8 432 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 TMEM9Q9P0T7 183 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 RABL2AQ9UBK7 228 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 SUCOQ9UBS9 1254 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 FETUBQ9UGM5 382 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 KLHL3Q9UH77 587 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PCSK1NQ9UHG2 260 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PTBP2Q9UKA9 531 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CDH7Q9ULB5 785 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PHTF1Q9UMS5 762 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 AP4E1Q9UPM8 1137 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ERVK-11Q9UQG0 969 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CHKBQ9Y259 395 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 SIK3Q9Y2K2 1263 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ANGPTL3Q9Y5C1 460 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 N6AMT1Q9Y5N5 214 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 DUSP10Q9Y6W6 482 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 MYH1P12882 1939 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 USP31Q70CQ4 1352 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 PFASO15067 1338 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 UBE4BO95155 1302 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 MYH2Q9UKX2 1941 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 A0A096LPE4 126 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 GOLGA8QA0A0J9YX86 632 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 A0A1W2PP55 124 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 A0A1W2PPZ6 126 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 A0A1W2PRG0 241 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 MEGF11A6BM72 1044 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 GOLGA8OA6NCC3 632 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CCDC160A6NGH7 325 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CCDC85CA6NKD9 419 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 FAM170BA6NMN3 283 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms