RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, human

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-208	ENST00000468600	RAB11FIP4	Q86YS3	637 aa		4.2	□□□□□ -1.74
SSB-208	ENST00000468600	ADHFE1	Q8IWW8	467 aa		4.2	□□□□□ -1.74
SSB-208	ENST00000468600	DNAJC5G	Q8N7S2	189 aa		4.2	□□□□□ -1.74
SSB-208	ENST00000468600	PNISR	Q8TF01	805 aa	Known RBP	4.2	□□□□□ -1.74
SSB-208	ENST00000468600	EFHD1	Q9BUP0	239 aa		4.2	□□□□□ -1.74
SSB-208	ENST00000468600	PCDH12	Q9NPG4	1184 aa		4.2	□□□□□ -1.74
SSB-208	ENST00000468600	ICK	Q9UPZ9	632 aa		4.2	□□□□□ -1.74
SSB-208	ENST00000468600	OBSCN	Q5VST9	7968 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	KRTAP9-6	A8MVA2	160 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	AP4M1	O00189	453 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	PMPCB	O75439	489 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	RNF8	O76064	485 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	MT-CO3	P00414	261 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	PSG1	P11464	419 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	ALDH5A1	P51649	535 aa	Predicted RBP	4.19	□□□□□ -1.74
SSB-208	ENST00000468600	BCAT1	P54687	386 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	SUMO2	P61956	95 aa	Known RBP	4.19	□□□□□ -1.74
SSB-208	ENST00000468600	PLA1A	Q53H76	456 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	BRDT	Q58F21	947 aa	Predicted RBP	4.19	□□□□□ -1.74
SSB-208	ENST00000468600	ZNF628	Q5EBL2	1059 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	CERCAM	Q5T4B2	595 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	GRAMD1C	Q8IYS0	662 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	SLC15A4	Q8N697	577 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	LINC01465	Q8N7H1	131 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	CCDC17	Q96LX7	622 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	MMS19	Q96T76	1030 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	P2RX7	Q99572	595 aa	Known RBP	4.19	□□□□□ -1.74
SSB-208	ENST00000468600	C17orf80	Q9BSJ5	609 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	TRMO	Q9BU70	441 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	XPNPEP3	Q9NQH7	507 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	HOMER2	Q9NSB8	354 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	CPA4	Q9UI42	421 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	COL4A3BP	Q9Y5P4	624 aa		4.19	□□□□□ -1.74
SSB-208	ENST00000468600	ZMYM2	Q9UBW7	1377 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600		B4DGG1	531 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600		H3BML4	177 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	CNOT3	O75175	753 aa	Known RBP	4.18	□□□□□ -1.74
SSB-208	ENST00000468600	OFD1	O75665	1012 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	HOXD9	P28356	352 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB-208	ENST00000468600	CDKN2A	P42771	156 aa	Known RBP	4.18	□□□□□ -1.74
SSB-208	ENST00000468600	NEK2	P51955	445 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	PSG6	Q00889	435 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	ZNF91	Q05481	1191 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	CCNI	Q14094	377 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	UBAP2	Q5T6F2	1119 aa	Known RBP	4.18	□□□□□ -1.74
SSB-208	ENST00000468600	DAB2IP	Q5VWQ8	1189 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	ZNF783	Q6ZMS7	281 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	PTCHD4	Q6ZW05	846 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	PIP4P1	Q86T03	277 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	LIX1L	Q8IVB5	337 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	OSR1	Q8TAX0	266 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB-208	ENST00000468600	BPIFB1	Q8TDL5	484 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	DIS3L	Q8TF46	1054 aa	Known RBP	4.18	□□□□□ -1.74
SSB-208	ENST00000468600	CTHRC1	Q96CG8	243 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	SIGLEC11	Q96RL6	698 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	FAM234A	Q9H0X4	552 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	ARMT1	Q9H993	441 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	PAXBP1	Q9Y5B6	917 aa		4.18	□□□□□ -1.74
SSB-208	ENST00000468600	GTPBP1	O00178	669 aa	Known RBP	4.17	□□□□□ -1.74
SSB-208	ENST00000468600	PSMD9	O00233	223 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	BTN3A1	O00481	513 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	GCAT	O75600	419 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	VNN1	O95497	513 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	TOMM40	O96008	361 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	NPR1	P16066	1061 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	THBS4	P35443	961 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	ME1	P48163	572 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	PRKAG1	P54619	331 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	RHD	Q02161	417 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	ID2	Q02363	134 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	CTBP1	Q13363	440 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	LARS2	Q15031	903 aa	Known RBP	4.17	□□□□□ -1.74
SSB-208	ENST00000468600	DENND2C	Q68D51	928 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	DPY19L3	Q6ZPD9	716 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	OR6B3	Q8NGW1	331 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	MAP4K1	Q92918	833 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	PPP2R3C	Q969Q6	453 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	TRIM5	Q9C035	493 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	BRINP2	Q9C0B6	783 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	TRIM36	Q9NQ86	728 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	ZSCAN32	Q9NX65	697 aa		4.17	□□□□□ -1.74
SSB-208	ENST00000468600	DRG1	Q9Y295	367 aa	Known RBP	4.17	□□□□□ -1.74
SSB-208	ENST00000468600	LACTBL1	A8MY62	500 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	TLR2	O60603	784 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	TULP3	O75386	442 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	PF4V1	P10720	104 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	CYP19A1	P11511	503 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB-208	ENST00000468600	APEH	P13798	732 aa	Known RBP	4.16	□□□□□ -1.74
SSB-208	ENST00000468600	LMAN2	Q12907	356 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	UBE2Q1	Q7Z7E8	422 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	ANKRD13B	Q86YJ7	626 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	DENND1C	Q8IV53	801 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	ZCRB1	Q8TBF4	217 aa	Known RBP	4.16	□□□□□ -1.74
SSB-208	ENST00000468600	TMEM171	Q8WVE6	324 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	AIFM3	Q96NN9	605 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB-208	ENST00000468600	SMURF2	Q9HAU4	748 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	GBA2	Q9HCG7	927 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB-208	ENST00000468600	MDFIC	Q9P1T7	246 aa		4.16	□□□□□ -1.74
SSB-208	ENST00000468600	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms