RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 UNKLQ9H9P5 680 aaKnown RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 GBA2Q9HCG7 927 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TMEM160Q9NX00 188 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 NDUFAF4Q9P032 175 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 DNMT3BQ9UBC3 853 aaKnown RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 DNAJB11Q9UBS4 358 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 BAG5Q9UL15 447 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TBX20Q9UMR3 447 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 CLCA2Q9UQC9 943 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TTLL3Q9Y4R7 772 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 CEP162Q5TB80 1403 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 CEP164Q9UPV0 1460 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 A0A087X0M5 115 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 A0A1B0GX30 115 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 DRGXA6NNA5 263 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 KIF28PB7ZC32 967 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 SPTLC2O15270 562 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 CDC14BO60729 498 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 TMCC2O75069 709 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 MFAP3LO75121 409 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ERN1O75460 977 aaKnown RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 PRSS23O95084 383 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 FCER1AP12319 257 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 MYCLP12524 364 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 HGFP14210 728 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 MGAT1P26572 445 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 CALRP27797 417 aaKnown RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 CFPP27918 469 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 POLD2P49005 469 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 MTHFSP49914 203 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 PGDP52209 483 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 DGKEP52429 567 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ARF3P61204 181 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ADAM8P78325 824 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ARF1P84077 181 aaKnown RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 MYO1EQ12965 1108 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 E2F2Q14209 437 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 GPR68Q15743 365 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 TSTQ16762 297 aaKnown RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 NBPF8Q3BBV2 869 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZIK1Q3SY52 487 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 PREPLQ4J6C6 727 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 MAP3K21Q5TCX8 1036 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ARHGAP40Q5TG30 622 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 TSHZ3Q63HK5 1081 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ICE2Q659A1 982 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ABLIM2Q6H8Q1 611 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 FOXR2Q6PJQ5 311 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 C16orf54Q6UWD8 224 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 PPP1R32Q7Z5V6 425 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 CPLX4Q7Z7G2 160 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 FAM124AQ86V42 546 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 MB21D1Q8N884 522 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ANKRD44Q8N8A2 993 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 TMEM171Q8WVE6 324 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 RNF125Q96EQ8 232 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 RBM17Q96I25 401 aaKnown RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 FAM227BQ96M60 508 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 C7orf26Q96N11 449 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 DPYSL5Q9BPU6 564 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZCWPW1Q9H0M4 648 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 SMOC2Q9H3U7 446 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 HAUS2Q9NVX0 235 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 RGS17Q9UGC6 210 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 GPR34Q9UPC5 381 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 DNMBPQ6XZF7 1577 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 GOLGA3Q08378 1498 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 LMTK3Q96Q04 1460 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 KIF21BO75037 1637 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 KAT6BQ8WYB5 2073 aa4.17□□□□□ -1.74
HMGB1P25-201ENST00000468402 CTTNBP2Q8WZ74 1663 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 TDRD9Q8NDG6 1382 aaKnown RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 LAMC3Q9Y6N6 1575 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 A0A1B0GTL3 188 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 CCDC195A0A1B0GUA6 201 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 PGPEP1LA6NFU8 196 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 KLK10O43240 276 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 ORC4O43929 436 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 TSPAN3O60637 253 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 CER1O95813 267 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 SLC3A2P08195 630 aaKnown RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 ARP10275 920 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 SLC5A2P31639 672 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 GSTM5P46439 218 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 KCNC1P48547 511 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 GATMP50440 423 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 CCR9P51686 369 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZNF134P52741 427 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 DRG2P55039 364 aaKnown RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 LOXL3P58215 753 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 DCAF7P61962 342 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 RPP30P78346 268 aaKnown RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 GALNT2Q10471 571 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 NFYCQ13952 458 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 NFIL3Q16649 462 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 CTXN3Q4LDR2 81 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 RGS7BPQ6MZT1 257 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 MFSD5Q6N075 450 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 RINLQ6ZS11 566 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms