RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 MYOFQ9NZM1 2061 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 LEFTY2O00292 366 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 BIN1O00499 593 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 FAM200BP0CF97 657 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 ADORA2BP29275 332 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 IFNAR2P48551 515 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 CCINQ13939 588 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 GAS6Q14393 721 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 EML3Q32P44 896 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 KLHL10Q6JEL2 608 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 TTI2Q6NXR4 508 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 CPA6Q8N4T0 437 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 NELFBQ8WX92 580 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 ATP2A3Q93084 1043 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 CHFRQ96EP1 664 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 FAM124BQ9H5Z6 455 aaPredicted RBP18.1■□□□□ 0.49
SSBP1-207ENST00000468267 METTL14Q9HCE5 456 aaKnown RBP18.1■□□□□ 0.49
SSBP1-207ENST00000468267 CISHQ9NSE2 258 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 RBM12Q9NTZ6 932 aaKnown RBP18.1■□□□□ 0.49
SSBP1-207ENST00000468267 WNT6Q9Y6F9 365 aa18.1■□□□□ 0.49
SSBP1-207ENST00000468267 TRDMT1O14717 391 aaKnown RBP18.09■□□□□ 0.49
SSBP1-207ENST00000468267 ZDHHC11BP0C7U3 371 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 AMPD2Q01433 879 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 CLEC20AQ6ZU45 233 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 SYNPOQ8N3V7 929 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 SPEM1Q8N4L4 309 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 KIAA1958Q8N8K9 716 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 NELL1Q92832 810 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 LINC00597Q9H2U6 94 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 FBXO44Q9H4M3 255 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 ECT2Q9H8V3 914 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 CPQQ9Y646 472 aa18.09■□□□□ 0.49
SSBP1-207ENST00000468267 MYO16Q9Y6X6 1858 aa18.08■□□□□ 0.49
SSBP1-207ENST00000468267 BICDL2A1A5D9 508 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 HHLA1C9JL84 531 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 GJA4P35212 333 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 CCR3P51677 355 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 TMEM196Q5HYL7 178 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 HECTD3Q5T447 861 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 TSSK4Q6SA08 328 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 SLC4A11Q8NBS3 891 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 HEXIM2Q96MH2 286 aaKnown RBP18.08■□□□□ 0.48
SSBP1-207ENST00000468267 ARID3AQ99856 593 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 FAM126AQ9BYI3 521 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-207ENST00000468267 ZSCAN32Q9NX65 697 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 GMIPQ9P107 970 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 CTNND2Q9UQB3 1225 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 PCDHGA2Q9Y5H1 932 aa18.08■□□□□ 0.48
SSBP1-207ENST00000468267 PMM2O15305 246 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 COCHO43405 550 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 LMNAP02545 664 aaKnown RBP18.07■□□□□ 0.48
SSBP1-207ENST00000468267 MBL2P11226 248 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-207ENST00000468267 TDGF1P13385 188 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 CXCL12P48061 93 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 FMO5P49326 533 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 TUBP50607 506 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 RAD23BP54727 409 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 GRSF1Q12849 480 aaKnown RBP eCLIP18.07■□□□□ 0.48
SSBP1-207ENST00000468267 NR1H3Q13133 447 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 PPP2R5DQ14738 602 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 CCDC40Q4G0X9 1142 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 ZNF394Q53GI3 561 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 PPP1R26Q5T8A7 1209 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-207ENST00000468267 FSTL4Q6MZW2 842 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 Q6ZS52 159 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 GPRIN1Q7Z2K8 1008 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 DDX42Q86XP3 938 aaKnown RBP eCLIP18.07■□□□□ 0.48
SSBP1-207ENST00000468267 ZBTB44Q8NCP5 570 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 TMEM176AQ96HP8 235 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 DUSP16Q9BY84 665 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 PNPLA8Q9NP80 782 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 SMPD4Q9NXE4 827 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 KIAA1468Q9P260 1216 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 SCML2Q9UQR0 700 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 DMXL1Q9Y485 3027 aa18.07■□□□□ 0.48
SSBP1-207ENST00000468267 ANP32AP39687 249 aaKnown RBP18.06■□□□□ 0.48
SSBP1-207ENST00000468267 PGFP49763 221 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 GALK1P51570 392 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 SATB1Q01826 763 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 PAK1Q13153 545 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 CUL2Q13617 745 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 CAMK4Q16566 473 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 TRIML1Q8N9V2 468 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 ATRIPQ8WXE1 791 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 ZFRQ96KR1 1074 aaKnown RBP18.06■□□□□ 0.48
SSBP1-207ENST00000468267 CCSER2Q9H7U1 834 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 FBRSL1Q9HCM7 1045 aaKnown RBP18.06■□□□□ 0.48
SSBP1-207ENST00000468267 TLR8Q9NR97 1041 aaKnown RBP18.06■□□□□ 0.48
SSBP1-207ENST00000468267 CFAP97Q9P2B7 532 aa18.06■□□□□ 0.48
SSBP1-207ENST00000468267 SLC9A3R1O14745 358 aaPredicted RBP18.05■□□□□ 0.48
SSBP1-207ENST00000468267 PAPSS2O95340 614 aaPredicted RBP18.05■□□□□ 0.48
SSBP1-207ENST00000468267 NFATC1O95644 943 aa18.05■□□□□ 0.48
SSBP1-207ENST00000468267 DRD1P21728 446 aa18.05■□□□□ 0.48
SSBP1-207ENST00000468267 KIF11P52732 1056 aa18.05■□□□□ 0.48
SSBP1-207ENST00000468267 NRLP54845 237 aa18.05■□□□□ 0.48
SSBP1-207ENST00000468267 STX17P56962 302 aa18.05■□□□□ 0.48
SSBP1-207ENST00000468267 ADGRG2Q8IZP9 1017 aa18.05■□□□□ 0.48
SSBP1-207ENST00000468267 EXOC4Q96A65 974 aa18.05■□□□□ 0.48
SSBP1-207ENST00000468267 JAKMIP2Q96AA8 810 aa18.05■□□□□ 0.48
SSBP1-207ENST00000468267 P2RY13Q9BPV8 354 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms