RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 DSG1Q02413 1049 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 TEKQ02763 1124 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 TROAPQ12815 778 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 MTAPQ13126 283 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 SIM2Q14190 667 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 IMMTQ16891 758 aaKnown RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 SLC35G1Q2M3R5 365 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 YOD1Q5VVQ6 348 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ABHD15Q6UXT9 468 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 RTL10Q7L3V2 364 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 GET4Q7L5D6 327 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 NIPA1Q7RTP0 329 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ZNF589Q86UQ0 364 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 RNF168Q8IYW5 571 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ADCY4Q8NFM4 1077 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 URGCPQ8TCY9 931 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 PGBD4Q96DM1 585 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 RRP36Q96EU6 259 aaKnown RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 FAM167AQ96KS9 214 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 FAM227BQ96M60 508 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 MXRA8Q9BRK3 442 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 LZTS2Q9BRK4 669 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 PHF20Q9BVI0 1012 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 HERC2P3Q9BVR0 1158 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 LSM14BQ9BX40 385 aaKnown RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 VN1R3Q9BXE9 311 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ASPNQ9BXN1 380 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 GBP3Q9H0R5 595 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 PSTPIP2Q9H939 334 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 LY9Q9HBG7 655 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 GP6Q9HCN6 339 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 LUC7LQ9NQ29 371 aaKnown RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ZNF302Q9NR11 478 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ARHGEF4Q9NR80 690 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 FNIP2Q9P278 1114 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 SEC63Q9UGP8 760 aaKnown RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 MTF2Q9Y483 593 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 IGSF10Q6WRI0 2623 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 hCG_2014768A0A024R1R8 64 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 HRKO00198 91 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 TBX1O43435 398 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 ECI2O75521 394 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 RFPL2O75678 378 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 KCNK5O95279 499 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 EFEMP2O95967 443 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 SFPQP23246 707 aaKnown RBP eCLIP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 KIF5BP33176 963 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 SLC11A1P49279 550 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 GLUD2P49448 558 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 GPC3P51654 580 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 AK2P54819 239 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 MLLT6P55198 1093 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 PPP2R2AP63151 447 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 FOXD4Q12950 439 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 C21orf62-AS1Q17RA5 79 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 LONRF2Q1L5Z9 754 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 AASDHQ4L235 1098 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 CEP55Q53EZ4 464 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 FAM209AQ5JX71 171 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 MIS18BP1Q6P0N0 1132 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 C1orf228Q6PIY5 440 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 TSSK4Q6SA08 328 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 PARM1Q6UWI2 310 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 TPRG1Q6ZUI0 275 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 LONP2Q86WA8 852 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 ZNF227Q86WZ6 799 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 SMAP1Q8IYB5 467 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 METTL13Q8N6R0 699 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 LINC01465Q8N7H1 131 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 MSANTD3Q96H12 275 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 EXOC2Q96KP1 924 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 MBOAT7Q96N66 472 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 FAM193BQ96PV7 902 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 MTA3Q9BTC8 594 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 DSCC1Q9BVC3 393 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 INO80BQ9C086 356 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 PRDM14Q9GZV8 571 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 SLKQ9H2G2 1235 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 TRPV5Q9NQA5 729 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 CHST7Q9NS84 486 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 WHRNQ9P202 907 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 ANKFY1Q9P2R3 1169 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 DNAJB4Q9UDY4 337 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 WASF3Q9UPY6 502 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 AKT3Q9Y243 479 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 FAN1Q9Y2M0 1017 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 PCDHGA5Q9Y5G8 931 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 FREM2Q5SZK8 3169 aa6.06□□□□□ -1.44
PTCD3-207ENST00000467273 BAZ2BQ9UIF8 2168 aaKnown RBP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 MYH9P35579 1960 aaKnown RBP6.06□□□□□ -1.44
PTCD3-207ENST00000467273 AKAP13Q12802 2813 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 ERICH2A1L162 156 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 MEIS1O00470 390 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 NRP1O14786 923 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 SUV39H1O43463 412 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 OFD1O75665 1012 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 PPM1BO75688 479 aa6.05□□□□□ -1.44
PTCD3-207ENST00000467273 FOSP01100 380 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-207ENST00000467273 ITGA4P13612 1032 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms