RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ZDHHC11BP0C7U3 371 aa13□□□□□ -0.33
UBR4-211ENST00000467272 ADH5P11766 374 aa13□□□□□ -0.33
UBR4-211ENST00000467272 GJB2P29033 226 aa13□□□□□ -0.33
UBR4-211ENST00000467272 TAF10Q12962 218 aa13□□□□□ -0.33
UBR4-211ENST00000467272 RESTQ13127 1097 aa13□□□□□ -0.33
UBR4-211ENST00000467272 BYSLQ13895 437 aaKnown RBP13□□□□□ -0.33
UBR4-211ENST00000467272 SF3A1Q15459 793 aaKnown RBP13□□□□□ -0.33
UBR4-211ENST00000467272 DUOXA1Q1HG43 343 aa13□□□□□ -0.33
UBR4-211ENST00000467272 LY6G5CQ5SRR4 150 aa13□□□□□ -0.33
UBR4-211ENST00000467272 LMBRD2Q68DH5 695 aaPredicted RBP13□□□□□ -0.33
UBR4-211ENST00000467272 ARMCX6Q7L4S7 300 aa13□□□□□ -0.33
UBR4-211ENST00000467272 SLC41A1Q8IVJ1 513 aa13□□□□□ -0.33
UBR4-211ENST00000467272 TTC16Q8NEE8 873 aa13□□□□□ -0.33
UBR4-211ENST00000467272 HMGB4Q8WW32 186 aa13□□□□□ -0.33
UBR4-211ENST00000467272 OTUB2Q96DC9 234 aa13□□□□□ -0.33
UBR4-211ENST00000467272 TMX3Q96JJ7 454 aa13□□□□□ -0.33
UBR4-211ENST00000467272 GZF1Q9H116 711 aaPredicted RBP13□□□□□ -0.33
UBR4-211ENST00000467272 ZDHHC4Q9NPG8 344 aa13□□□□□ -0.33
UBR4-211ENST00000467272 ARHGEF4Q9NR80 690 aa13□□□□□ -0.33
UBR4-211ENST00000467272 EHD2Q9NZN4 543 aa13□□□□□ -0.33
UBR4-211ENST00000467272 FBXO2Q9UK22 296 aaPredicted RBP13□□□□□ -0.33
UBR4-211ENST00000467272 PCDHB13Q9Y5F0 798 aa13□□□□□ -0.33
UBR4-211ENST00000467272 IGHV1OR15-9A0A0B4J2B8 117 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 TCRBV21S2A2A0A5A6 115 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.99□□□□□ -0.33
UBR4-211ENST00000467272 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 SCAMP3O14828 347 aaKnown RBP12.99□□□□□ -0.33
UBR4-211ENST00000467272 MAP3K13O43283 966 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 AP5Z1O43299 807 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 GRIK1P39086 918 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 PI4KAP42356 2102 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 MYO1EQ12965 1108 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 SLC14A1Q13336 389 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 ALCAMQ13740 583 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 ZNF423Q2M1K9 1284 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 SOWAHCQ53LP3 525 aaPredicted RBP12.99□□□□□ -0.33
UBR4-211ENST00000467272 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
UBR4-211ENST00000467272 CHCHD4Q8N4Q1 142 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 OVCA2Q8WZ82 227 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 WBP2Q969T9 261 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 ZNF419Q96HQ0 510 aaPredicted RBP12.99□□□□□ -0.33
UBR4-211ENST00000467272 MRPL45Q9BRJ2 306 aaKnown RBP12.99□□□□□ -0.33
UBR4-211ENST00000467272 SMPD4Q9NXE4 827 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 CALCOCO1Q9P1Z2 691 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 TBC1D14Q9P2M4 693 aa12.99□□□□□ -0.33
UBR4-211ENST00000467272 MORC2Q9Y6X9 1032 aaPredicted RBP12.99□□□□□ -0.33
UBR4-211ENST00000467272 KIAA0391O15091 583 aaKnown RBP12.98□□□□□ -0.33
UBR4-211ENST00000467272 COCHO43405 550 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 CBFA2T3O75081 653 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 TULP3O75386 442 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 STAU1O95793 577 aaKnown RBP12.98□□□□□ -0.33
UBR4-211ENST00000467272 CST3P01034 146 aaPredicted RBP12.98□□□□□ -0.33
UBR4-211ENST00000467272 KRT19P08727 400 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 PDGFRBP09619 1106 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 TUBP50607 506 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 KDSRQ06136 332 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 GFPT1Q06210 699 aaPredicted RBP12.98□□□□□ -0.33
UBR4-211ENST00000467272 ZNF33AQ06730 810 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 HNRNPDQ14103 355 aaKnown RBP12.98□□□□□ -0.33
UBR4-211ENST00000467272 PAQR9Q6ZVX9 377 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 BRAPQ7Z569 592 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 RABEPKQ7Z6M1 372 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 CBWD2Q8IUF1 395 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 MINDY1Q8N5J2 469 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 TERB1Q8NA31 727 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 OR2I1PQ8NGU4 316 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 ADAMTS14Q8WXS8 1223 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 GABRG3Q99928 467 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 B3GNT5Q9BYG0 378 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 XYLT2Q9H1B5 865 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 TBC1D7Q9P0N9 293 aa12.98□□□□□ -0.33
UBR4-211ENST00000467272 ACACAQ13085 2346 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 A0A087X0B3 334 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 A0A1W2PQD8 194 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 TRIM24O15164 1050 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 OPHN1O60890 802 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 DKK1O94907 266 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 GCNT3O95395 438 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 TMEM191BP0C7N4 346 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 PTPN1P18031 435 aaKnown RBP12.97□□□□□ -0.33
UBR4-211ENST00000467272 ANXA13P27216 316 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 GNL1P36915 607 aaPredicted RBP12.97□□□□□ -0.33
UBR4-211ENST00000467272 PGFP49763 221 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 CYP27A1Q02318 531 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 RPL6Q02878 288 aaKnown RBP12.97□□□□□ -0.33
UBR4-211ENST00000467272 GAD2Q05329 585 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 MDH1BQ5I0G3 518 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 SLC36A4Q6YBV0 504 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 CCNI2Q6ZMN8 369 aaPredicted RBP12.97□□□□□ -0.33
UBR4-211ENST00000467272 TRAPPC11Q7Z392 1133 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 GLRX5Q86SX6 157 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 TTC30AQ86WT1 665 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 TMEM25Q86YD3 366 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 WDR49Q8IV35 697 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 GLIS3Q8NEA6 775 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 P2RY11Q96G91 374 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 ACOX2Q99424 681 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms