RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 TXNDC11Q6PKC3 985 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 METTL23Q86XA0 190 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 DCP1BQ8IZD4 617 aaKnown RBP7.57□□□□□ -1.2
SND1-205ENST00000467238 SYCP3Q8IZU3 236 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 PDCL2Q8N4E4 241 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 DCLK2Q8N568 766 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 PDILTQ8N807 584 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 LINC00301Q8NCQ3 95 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 CSGALNACT1Q8TDX6 532 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 GIPC2Q8TF65 315 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 ATRIPQ8WXE1 791 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 FAM84AQ96KN4 292 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 MDFIQ99750 246 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 HINFPQ9BQA5 517 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 FAM126AQ9BYI3 521 aaPredicted RBP7.57□□□□□ -1.2
SND1-205ENST00000467238 BACH2Q9BYV9 841 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 PANK2Q9BZ23 570 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 EPC1Q9H2F5 836 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 TNMDQ9H2S6 317 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 TASP1Q9H6P5 420 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 C8orf33Q9H7E9 229 aaPredicted RBP7.57□□□□□ -1.2
SND1-205ENST00000467238 LMAN1LQ9HAT1 526 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 PANK4Q9NVE7 773 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 TMLHEQ9NVH6 421 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 ABI2Q9NYB9 513 aaPredicted RBP7.57□□□□□ -1.2
SND1-205ENST00000467238 ZDHHC3Q9NYG2 299 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 RBAKQ9NYW8 714 aaPredicted RBP7.57□□□□□ -1.2
SND1-205ENST00000467238 AGAP1Q9UPQ3 857 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 KNTC1P50748 2209 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 ASPMQ8IZT6 3477 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 CHD6Q8TD26 2715 aa7.57□□□□□ -1.2
SND1-205ENST00000467238 CACNA1GO43497 2377 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 FAM208BQ5VWN6 2430 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 GOLGA8IPA6NC78 632 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 A6NJY4 79 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 GOLGA8JA6NMD2 632 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 SLC38A8A6NNN8 435 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 SPECC1L-ADORA2AF8WAN1 911 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 KIAA0391O15091 583 aaKnown RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 ATXN7O15265 892 aaPredicted RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 SPTLC2O15270 562 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 PPP6R2O75170 966 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 HMGA1P17096 107 aaKnown RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 CCR3P51677 355 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 TSPY1Q01534 308 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 STK38Q15208 465 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 NFE2Q16621 373 aaPredicted RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 ZNF468Q5VIY5 522 aaPredicted RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 ERMP1Q7Z2K6 904 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 TMEM150AQ86TG1 271 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 OSTM1Q86WC4 334 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 RALGPS2Q86X27 583 aaPredicted RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 CCDC65Q8IXS2 484 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 KIAA2013Q8IYS2 634 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 GPD1LQ8N335 351 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 LRRC52Q8N7C0 313 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 TSEN2Q8NCE0 465 aaKnown RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 GLIS3Q8NEA6 775 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 SPATA18Q8TC71 538 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 BPIFB1Q8TDL5 484 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 CACTINQ8WUQ7 758 aaKnown RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 LEO1Q8WVC0 666 aaPredicted RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 HPS3Q969F9 1004 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 RMDN1Q96DB5 314 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 ZFYVE19Q96K21 471 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 GCNAQ96QF7 691 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 PKMYT1Q99640 499 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 ACBD6Q9BR61 282 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 SLC46A2Q9BY10 475 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 KRTAP4-9Q9BYQ8 210 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 TRIM9Q9C026 710 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 MTMR12Q9C0I1 747 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 PCIF1Q9H4Z3 704 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 TMEM206Q9H813 350 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 PDE11AQ9HCR9 933 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 KBTBD4Q9NVX7 518 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 GDAP2Q9NXN4 497 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 GTSE1Q9NYZ3 720 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 SIX4Q9UIU6 781 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 ZMYM5Q9UJ78 669 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 ITGA11Q9UKX5 1188 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 L1RE1Q9UN81 338 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 SMG5Q9UPR3 1016 aaKnown RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 PCDHB5Q9Y5E4 795 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 GOLGA4Q13439 2230 aaKnown RBP7.56□□□□□ -1.2
SND1-205ENST00000467238 PLXND1Q9Y4D7 1925 aa7.56□□□□□ -1.2
SND1-205ENST00000467238 PTPRJQ12913 1337 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 KMT2BQ9UMN6 2715 aaPredicted RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 ACACAQ13085 2346 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 GABRDO14764 452 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 HUS1O60921 280 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 TADA3O75528 432 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 PAPSS2O95340 614 aaPredicted RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 TMEM191BP0C7N4 346 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CSH1P0DML2 217 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CSH2P0DML3 217 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 ACAT1P24752 427 aaKnown RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 CYP2F1P24903 491 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 DDX6P26196 483 aaKnown RBP eCLIP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms