RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 F8P00451 2351 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 C2orf78A6NCI8 922 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 KCNJ18B7U540 433 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 SLITRK3O94933 977 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 RBMS1P29558 406 aaKnown RBP13.59□□□□□ -0.23
UBR4-210ENST00000466969 ASIC1P78348 528 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 STARD3Q14849 445 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 SKIDA1Q1XH10 827 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 PTRH1Q86Y79 214 aaKnown RBP13.59□□□□□ -0.23
UBR4-210ENST00000466969 SRRM1Q8IYB3 904 aaKnown RBP13.59□□□□□ -0.23
UBR4-210ENST00000466969 KIAA1958Q8N8K9 716 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
UBR4-210ENST00000466969 TRMT2BQ96GJ1 504 aaKnown RBP13.59□□□□□ -0.23
UBR4-210ENST00000466969 ELF4Q99607 663 aaPredicted RBP13.59□□□□□ -0.23
UBR4-210ENST00000466969 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 PCED1AQ9H1Q7 454 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 SLCO1B1Q9Y6L6 691 aa13.59□□□□□ -0.23
UBR4-210ENST00000466969 SLC37A4O43826 429 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 TULP3O75386 442 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 PRPF40AO75400 957 aaKnown RBP13.58□□□□□ -0.24
UBR4-210ENST00000466969 GJB6O95452 261 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 ACADMP11310 421 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 LRPAP1P30533 357 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 NAMPTP43490 491 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 GPR15P49685 360 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 TPMTP51580 245 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 EFNA5P52803 228 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 LY6G5CQ5SRR4 150 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 THEM5Q8N1Q8 247 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 RUFY2Q8WXA3 655 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 SGF29Q96ES7 293 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 DEPDC7Q96QD5 511 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 HCN2Q9UL51 889 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 PCDHB5Q9Y5E4 795 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 PCNX1Q96RV3 2341 aa13.58□□□□□ -0.24
UBR4-210ENST00000466969 SCAMP3O14828 347 aaKnown RBP13.57□□□□□ -0.24
UBR4-210ENST00000466969 NOL4O94818 638 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 AGFG2O95081 481 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 LYPLA2O95372 231 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 CDC27P30260 824 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 ZXDBP98169 803 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 AKAP17AQ02040 695 aaKnown RBP13.57□□□□□ -0.24
UBR4-210ENST00000466969 PPP2R5AQ15172 486 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 KCNT1Q5JUK3 1230 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 PRAMEF14Q5SWL7 426 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 SDHAF4Q5VUM1 108 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 ZNF787Q6DD87 383 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 METTL23Q86XA0 190 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 ZNF564Q8TBZ8 553 aaPredicted RBP13.57□□□□□ -0.24
UBR4-210ENST00000466969 SAP25Q8TEE9 199 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 SCFD1Q8WVM8 642 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 BSNDQ8WZ55 320 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 SENP8Q96LD8 212 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 MYRFLQ96LU7 910 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 TCHPQ9BT92 498 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 ACE2Q9BYF1 805 aaPredicted RBP13.57□□□□□ -0.24
UBR4-210ENST00000466969 KCNMB3Q9NPA1 279 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.57□□□□□ -0.24
UBR4-210ENST00000466969 CELSR2Q9HCU4 2923 aa13.57□□□□□ -0.24
UBR4-210ENST00000466969 SPENQ96T58 3664 aaKnown RBP13.57□□□□□ -0.24
UBR4-210ENST00000466969 GFRA2O00451 464 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 YKT6O15498 198 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 GRIK1P39086 918 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 CASRP41180 1078 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 RPL10AP62906 217 aaKnown RBP13.56□□□□□ -0.24
UBR4-210ENST00000466969 SKOR1P84550 965 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 GRIN1Q05586 938 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 ETFBKMTQ8IXQ9 262 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 DCP1BQ8IZD4 617 aaKnown RBP13.56□□□□□ -0.24
UBR4-210ENST00000466969 PIGOQ8TEQ8 1089 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 PRCCQ92733 491 aaPredicted RBP13.56□□□□□ -0.24
UBR4-210ENST00000466969 SKA1Q96BD8 255 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 SIPA1Q96FS4 1042 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 EIF2AK1Q9BQI3 630 aaKnown RBP13.56□□□□□ -0.24
UBR4-210ENST00000466969 OSBPL3Q9H4L5 887 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 TBC1D14Q9P2M4 693 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 CRYBG3Q68DQ2 2970 aa13.56□□□□□ -0.24
UBR4-210ENST00000466969 A0A1B0GTL3 188 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
UBR4-210ENST00000466969 K7ERI5 159 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 MCF2P10911 925 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 PFKLP17858 780 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 ACP1P24666 158 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 CLN3Q13286 438 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 NOLC1Q14978 699 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBR4-210ENST00000466969 DDR2Q16832 855 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 FUT11Q495W5 492 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 GRAMD4Q6IC98 578 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 IGF2-ASQ6U949 168 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 FAM124AQ86V42 546 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 LRRTM3Q86VH5 581 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 ATCAYQ86WG3 371 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 TMEM130Q8N3G9 435 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 MOCOSQ96EN8 888 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 KIFC3Q9BVG8 833 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 MKRN2Q9H000 416 aaKnown RBP13.55□□□□□ -0.24
UBR4-210ENST00000466969 GEMIN8Q9NWZ8 242 aaKnown RBP13.55□□□□□ -0.24
UBR4-210ENST00000466969 VPS54Q9P1Q0 977 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 DSEQ9UL01 958 aa13.55□□□□□ -0.24
UBR4-210ENST00000466969 BRPF3Q9ULD4 1205 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms