RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 RAPGEF4Q8WZA2 1011 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 FYTTD1Q96QD9 318 aaKnown RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 VN1R3Q9BXE9 311 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 TRIM5Q9C035 493 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 GBA2Q9HCG7 927 aaPredicted RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 GAR1Q9NY12 217 aaKnown RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 MTMR4Q9NYA4 1195 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 CCNL1Q9UK58 526 aaPredicted RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 DRG1Q9Y295 367 aaKnown RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 TRIM43BA6NCK2 446 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 MYO1CO00159 1063 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 IKBKBO14920 756 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 CD3EAPO15446 510 aaKnown RBP3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 RFPL1O75677 317 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 FGBP02675 491 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 HSPA6P17066 643 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 HOXD9P28356 352 aaPredicted RBP3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 PRKAG1P54619 331 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 RAB32Q13637 225 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 FHL1Q13642 323 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 RAPGEF1Q13905 1077 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 CCNIQ14094 377 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 ZNF260Q3ZCT1 412 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 PXDC1Q5TGL8 231 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 SHC4Q6S5L8 630 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 NPNTQ6UXI9 565 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 DEF8Q6ZN54 512 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 MAEAQ7L5Y9 396 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 IRF2BP2Q7Z5L9 587 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 SIRT6Q8N6T7 355 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 ADAMTS18Q8TE60 1221 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 WASF1Q92558 559 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 MAP4K1Q92918 833 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 TRIM43Q96BQ3 446 aaPredicted RBP3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 KAZALD1Q96I82 304 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 DPCDQ9BVM2 203 aaPredicted RBP3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 TMEM60Q9H2L4 133 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 LPAR3Q9UBY5 353 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 PAXBP1Q9Y5B6 917 aa3.71□□□□□ -1.82
GTF3C3-209ENST00000466862 TMEM232C9JQI7 657 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 H3BNC9 293 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 AGPSO00116 658 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 CCP110O43303 1012 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 SRGAP2O75044 1071 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 TOMM40O96008 361 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 MT-CO3P00414 261 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 PDGFRBP09619 1106 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 PRF1P14222 555 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 IL1R1P14778 569 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 KLRC1P26715 233 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 UQCRC1P31930 480 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 RAB27AP51159 221 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 SUMO2P61956 95 aaKnown RBP3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 LRRC41Q15345 812 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 TWIST1Q15672 202 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 APOA5Q6Q788 366 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 KCTD20Q7Z5Y7 419 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 KIAA0319LQ8IZA0 1049 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 NANOGP1Q8N7R0 232 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 PRSS3P2Q8NHM4 247 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 ZNF518BQ9C0D4 1074 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 TRIM36Q9NQ86 728 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 DDX56Q9NY93 547 aaKnown RBP3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 ZNF180Q9UJW8 692 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 USP19O94966 1318 aa3.7□□□□□ -1.82
GTF3C3-209ENST00000466862 A6NNZ2 444 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 FAM227AF5H4B4 570 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 INSIG1O15503 277 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 FRS3O43559 492 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 RRP9O43818 475 aaKnown RBP3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 MYBP10242 640 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 MCM5P33992 734 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 TIRAPP58753 221 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 RBMS2Q15434 407 aaKnown RBP3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 MRPL10Q7Z7H8 261 aaKnown RBP3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 LIX1LQ8IVB5 337 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 CHPFQ8IZ52 775 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 SAMD14Q8IZD0 417 aaPredicted RBP3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 MPP5Q8N3R9 675 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 MAFAQ8NHW3 353 aaPredicted RBP3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 OSR1Q8TAX0 266 aaPredicted RBP3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 WIPF2Q8TF74 440 aaPredicted RBP3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 PPP2R3CQ969Q6 453 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 SPSB4Q96A44 273 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 LRGUKQ96M69 825 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 PPP1R9BQ96SB3 815 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 VPS51Q9UID3 782 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 RIMKLBQ9ULI2 386 aa3.69□□□□□ -1.82
GTF3C3-209ENST00000466862 CES2O00748 559 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 DSCR3O14972 297 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 GCATO75600 419 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 CT47B1P0C2W7 299 aaPredicted RBP3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 EPHA3P29320 983 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 SLC7A1P30825 629 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 CCKBRP32239 447 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 POLGP54098 1239 aaPredicted RBP3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 NPY5RQ15761 445 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 LEXMQ3ZCV2 418 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 TMTC4Q5T4D3 741 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 SPARTQ8N0X7 666 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms