RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SMARCD1Q96GM5 515 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 SPATA32Q96LK8 384 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 DMAP1Q9NPF5 467 aaPredicted RBP20.33■□□□□ 0.85
COL9A3-206ENST00000466532 EBF1Q9UH73 591 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 CHORDC1Q9UHD1 332 aaPredicted RBP20.33■□□□□ 0.85
COL9A3-206ENST00000466532 PLXND1Q9Y4D7 1925 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 AP1G2O75843 785 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 MYL1P05976 194 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 ZNF806P0C7X5 589 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 DGKEP52429 567 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 SLC5A3P53794 718 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 SGSM1Q2NKQ1 1148 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 ZACNQ401N2 412 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 CEP135Q66GS9 1140 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 TSTD1Q8NFU3 115 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 KRT82Q9NSB4 513 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 HPSEQ9Y251 543 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 PCDHGA5Q9Y5G8 931 aa20.32■□□□□ 0.84
COL9A3-206ENST00000466532 ANTXRLA6NF34 631 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 TNFRSF10BO14763 440 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 DCLK1O15075 740 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 COCHO43405 550 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 CALUO43852 315 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-206ENST00000466532 RPN1P04843 607 aaKnown RBP20.31■□□□□ 0.84
COL9A3-206ENST00000466532 SLC6A11P48066 632 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 ORC1Q13415 861 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 PPM1JQ5JR12 505 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 HECTD3Q5T447 861 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 SV2AQ7L0J3 742 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 FUKQ8N0W3 1084 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 TMC2Q8TDI7 906 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 DUSP15Q9H1R2 295 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-206ENST00000466532 TBC1D14Q9P2M4 693 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 FRMD4BQ9Y2L6 1034 aa20.31■□□□□ 0.84
COL9A3-206ENST00000466532 TNRC6BQ9UPQ9 1833 aaKnown RBP20.31■□□□□ 0.84
COL9A3-206ENST00000466532 E2F8A0AVK6 867 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 ADH1CP00326 375 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 ADH5P11766 374 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 CCDC130P13994 396 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 MPLP40238 635 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 PIK3CAP42336 1068 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 NDST1P52848 882 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 KRT85P78386 507 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 ELF2Q15723 593 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 PLA2G2CQ5R387 149 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 SPOPLQ6IQ16 392 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 RHBDF2Q6PJF5 856 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 CCDC33Q8N5R6 958 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 TAF4BQ92750 862 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 CHAMP1Q96JM3 812 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 ZFRQ96KR1 1074 aaKnown RBP20.3■□□□□ 0.84
COL9A3-206ENST00000466532 PNKPQ96T60 521 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 TPSD1Q9BZJ3 242 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 SMOC1Q9H4F8 434 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 CCSER2Q9H7U1 834 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 COMMD8Q9NX08 183 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 IL37Q9NZH6 218 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 GMIPQ9P107 970 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 HMGXB4Q9UGU5 601 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 MMP17Q9ULZ9 603 aa20.3■□□□□ 0.84
COL9A3-206ENST00000466532 IKBKBO14920 756 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 RHOBTB1O94844 696 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 KIF20AO95235 890 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 ASS1P00966 412 aaKnown RBP20.29■□□□□ 0.84
COL9A3-206ENST00000466532 APODP05090 189 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 GBP1P32455 592 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 EIF2DP41214 584 aaKnown RBP20.29■□□□□ 0.84
COL9A3-206ENST00000466532 SYKP43405 635 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 MRPS21P82921 87 aaKnown RBP20.29■□□□□ 0.84
COL9A3-206ENST00000466532 SNX30Q5VWJ9 437 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 IL31Q6EBC2 164 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 ANO7Q6IWH7 933 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 UNC93AQ86WB7 457 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 C12orf40Q86WS4 652 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 CRYBG2Q8N1P7 616 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 ZMIZ2Q8NF64 920 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 SLC2A14Q8TDB8 520 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 CCDC47Q96A33 483 aaKnown RBP20.29■□□□□ 0.84
COL9A3-206ENST00000466532 SMOQ99835 787 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 VPS45Q9NRW7 570 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 RXFP3Q9NSD7 469 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 FAM49BQ9NUQ9 324 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 TRAF3IP3Q9Y228 551 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 SH3BP1Q9Y3L3 701 aa20.29■□□□□ 0.84
COL9A3-206ENST00000466532 FAM92AA1XBS5 289 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 BEST1O76090 585 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 KAT7O95251 611 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 HLA-DRAP01903 254 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 ADRB1P08588 477 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 ZDHHC11BP0C7U3 371 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 PRR29P0C7W0 189 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 KCNA4P22459 653 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 ASPAP45381 313 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 TUBP50607 506 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 VAMP7P51809 220 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 NDUFA8P51970 172 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 LIMK1P53667 647 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 KDSRQ06136 332 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 MESP2Q0VG99 397 aa20.28■□□□□ 0.84
COL9A3-206ENST00000466532 LY6G5CQ5SRR4 150 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 324 ms