RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 KDELR1P24390 212 aa22.13■■□□□ 1.13
PPP1R3F-203ENST00000466508 PTPN9P43378 593 aa22.13■■□□□ 1.13
PPP1R3F-203ENST00000466508 ANKRD33Q7Z3H0 272 aa22.13■■□□□ 1.13
PPP1R3F-203ENST00000466508 COLGALT2Q8IYK4 626 aa22.13■■□□□ 1.13
PPP1R3F-203ENST00000466508 MREGQ8N565 214 aa22.13■■□□□ 1.13
PPP1R3F-203ENST00000466508 FAM172AQ8WUF8 416 aa22.13■■□□□ 1.13
PPP1R3F-203ENST00000466508 APBB2Q92870 758 aa22.13■■□□□ 1.13
PPP1R3F-203ENST00000466508 NEUROG2Q9H2A3 272 aa22.13■■□□□ 1.13
PPP1R3F-203ENST00000466508 NGRNQ9NPE2 291 aaKnown RBP22.13■■□□□ 1.13
PPP1R3F-203ENST00000466508 F8W810 466 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 TMEM189-UBE2V1I3L0A0 370 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 PRPSAP2O60256 369 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 AP1G2O75843 785 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 TYMPP19971 482 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 GBP1P32455 592 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 MAP3K7CLP57077 242 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 GPS2Q13227 327 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 EFHC1Q5JVL4 640 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 OVOS1Q6IE37 1185 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 SYDE1Q6ZW31 735 aaPredicted RBP22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 SMARCD1Q96GM5 515 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 C11orf84Q9BUA3 381 aaPredicted RBP22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 LRRC4Q9HBW1 653 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 NLRC5Q86WI3 1866 aa22.12■■□□□ 1.13
PPP1R3F-203ENST00000466508 ATN1P54259 1190 aaPredicted RBP22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 KRT17Q04695 432 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 RNASELQ05823 741 aaKnown RBP22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 ADCY1Q08828 1119 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 PPP1R7Q15435 360 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 RAB6CQ53S08 254 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 INTS6LQ5JSJ4 861 aaKnown RBP22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 FAM171BQ6P995 826 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 KCTD6Q8NC69 237 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 ATL2Q8NHH9 583 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 HSPH1Q92598 858 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 RAB6CQ9H0N0 254 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 HSF2BPO75031 334 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 GAS8O95995 478 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 SIX6OS1Q8N1H7 587 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 MYLPFQ96A32 169 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 SMOQ99835 787 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 CRISPLD2Q9H0B8 497 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 PCDHB8Q9UN66 801 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 SNX24Q9Y343 169 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 PCDHB7Q9Y5E2 793 aa22.11■■□□□ 1.13
PPP1R3F-203ENST00000466508 RPL21P46778 160 aaKnown RBP22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 MNX1P50219 401 aaPredicted RBP22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 CDR1P51861 262 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 HDAC4P56524 1084 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 MRPS5P82675 430 aaKnown RBP22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 MLLT1Q03111 559 aaPredicted RBP22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 DRICH1Q6PGQ1 229 aaPredicted RBP22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 SLC39A5Q6ZMH5 540 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 ABI1Q8IZP0 508 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 THEM5Q8N1Q8 247 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 TSEN2Q8NCE0 465 aaKnown RBP22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 TEKT4Q8WW24 435 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 CENPIQ92674 756 aaPredicted RBP22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 CCDC114Q96M63 670 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 TBCBQ99426 244 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 PKMYT1Q99640 499 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 FAM118BQ9BPY3 351 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 HIPK3Q9H422 1215 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 ZDHHC18Q9NUE0 388 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 GRHL1Q9NZI5 618 aa22.1■■□□□ 1.13
PPP1R3F-203ENST00000466508 LIASO43766 372 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 CD48P09326 243 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 BOLA3Q53S33 107 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 ZMIZ2Q8NF64 920 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 OR10T2Q8NGX3 314 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 FAM193BQ96PV7 902 aaPredicted RBP22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 FMO2Q99518 471 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 DDX23Q9BUQ8 820 aaKnown RBP22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 CSNK1G1Q9HCP0 422 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 TMEM30AQ9NV96 361 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 MICAL3Q7RTP6 2002 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 ENDOD1O94919 500 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 PARNO95453 639 aaKnown RBP22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 HSPA9P38646 679 aaKnown RBP22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 MATKP42679 507 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 OR1G1P47890 313 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 TKTL1P51854 596 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 CACNA2D1P54289 1103 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 CBX1P83916 185 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 YWHAHQ04917 246 aaPredicted RBP22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 PTK6Q13882 451 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 MAPRE1Q15691 268 aaKnown RBP22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 BBS12Q6ZW61 710 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 FAM149B1Q96BN6 582 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 KCNK16Q96T55 309 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 CALN1Q9BXU9 219 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 DNAJB4Q9UDY4 337 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 PATJQ8NI35 1801 aa22.09■■□□□ 1.13
PPP1R3F-203ENST00000466508 GOLGA6BA6NDN3 693 aa22.08■■□□□ 1.13
PPP1R3F-203ENST00000466508 DCDC2CA8MYV0 355 aa22.08■■□□□ 1.13
PPP1R3F-203ENST00000466508 DAB1O75553 588 aa22.08■■□□□ 1.13
PPP1R3F-203ENST00000466508 FBXO21O94952 628 aa22.08■■□□□ 1.13
PPP1R3F-203ENST00000466508 TFE3P19532 575 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms