RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 KCTD6Q8NC69 237 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 AAASQ9NRG9 546 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 ANAPC5Q9UJX4 755 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 NOVA2Q9UNW9 492 aaKnown RBP19.12■□□□□ 0.65
COL9A3-205ENST00000466192 TIMM13Q9Y5L4 95 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-205ENST00000466192 RIPK2O43353 540 aa19.11■□□□□ 0.65
COL9A3-205ENST00000466192 GNRH1P01148 92 aa19.11■□□□□ 0.65
COL9A3-205ENST00000466192 CKBP12277 381 aa19.11■□□□□ 0.65
COL9A3-205ENST00000466192 DYNLT1P63172 113 aa19.11■□□□□ 0.65
COL9A3-205ENST00000466192 GLIS1Q8NBF1 620 aa19.11■□□□□ 0.65
COL9A3-205ENST00000466192 TSPYL1Q9H0U9 437 aa19.11■□□□□ 0.65
COL9A3-205ENST00000466192 CYLDQ9NQC7 956 aa19.11■□□□□ 0.65
COL9A3-205ENST00000466192 DNAJC17Q9NVM6 304 aaKnown RBP19.11■□□□□ 0.65
COL9A3-205ENST00000466192 DDX43Q9NXZ2 648 aaKnown RBP19.11■□□□□ 0.65
COL9A3-205ENST00000466192 SAE1Q9UBE0 346 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-205ENST00000466192 DCDC2CA8MYV0 355 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 CST8O60676 142 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 CAND2O75155 1236 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 KLRC2P26717 231 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 SDC4P31431 198 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 RPL9P32969 192 aaKnown RBP19.1■□□□□ 0.65
COL9A3-205ENST00000466192 MAP2K2P36507 400 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 VEGFBP49765 207 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 GUCY1A3Q02108 690 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 LMNB2Q03252 620 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 AGBL2Q5U5Z8 902 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 FAM172AQ8WUF8 416 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 HSFY1Q96LI6 401 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 DUSP16Q9BY84 665 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 NGRNQ9NPE2 291 aaKnown RBP19.1■□□□□ 0.65
COL9A3-205ENST00000466192 A0A1W2PQ45 241 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-205ENST00000466192 A0A1W2PQY0 241 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 SMIM23A6NLE4 172 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 XPO1O14980 1071 aaKnown RBP19.1■□□□□ 0.65
COL9A3-205ENST00000466192 BEST1O76090 585 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 PLCB3Q01970 1234 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 OASLQ15646 514 aaKnown RBP19.1■□□□□ 0.65
COL9A3-205ENST00000466192 MDH1BQ5I0G3 518 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 TRAF7Q6Q0C0 670 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 DSTYKQ6XUX3 929 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 BBS12Q6ZW61 710 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 SLC26A9Q7LBE3 791 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 PIGZQ86VD9 579 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 HOOK3Q86VS8 718 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 PWWP2AQ96N64 755 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 TSEN34Q9BSV6 310 aaKnown RBP19.1■□□□□ 0.65
COL9A3-205ENST00000466192 CDC42EP4Q9H3Q1 356 aaKnown RBP19.1■□□□□ 0.65
COL9A3-205ENST00000466192 CRTAC1Q9NQ79 661 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL9A3-205ENST00000466192 SQORQ9Y6N5 450 aa19.1■□□□□ 0.65
COL9A3-205ENST00000466192 TLDC2A0PJX2 215 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 PRPSAP2O60256 369 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 ENDOD1O94919 500 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 TFE3P19532 575 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-205ENST00000466192 ACADSBP45954 432 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 VCPP55072 806 aaKnown RBP19.09■□□□□ 0.65
COL9A3-205ENST00000466192 MAGOHP61326 146 aaKnown RBP19.09■□□□□ 0.65
COL9A3-205ENST00000466192 MBTPS1Q14703 1052 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 TIGD5Q53EQ6 642 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 EMC10Q5UCC4 262 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 IZUMO3Q5VZ72 239 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 TMEM86AQ8N2M4 240 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 NKD2Q969F2 451 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-205ENST00000466192 DDX23Q9BUQ8 820 aaKnown RBP19.09■□□□□ 0.65
COL9A3-205ENST00000466192 CALN1Q9BXU9 219 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 RABEP2Q9H5N1 569 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 HMX1Q9NP08 348 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-205ENST00000466192 DRG1Q9Y295 367 aaKnown RBP19.09■□□□□ 0.65
COL9A3-205ENST00000466192 EIF3HO15372 352 aaKnown RBP eCLIP19.09■□□□□ 0.652e-9■□□□□ 10.5
COL9A3-205ENST00000466192 ZSCAN5DPP0CG00 497 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 ETS1P14921 441 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 ARSEP51690 589 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 CAV1Q03135 178 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 P3H1Q32P28 736 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 ALLCQ8N6M5 410 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 SLC43A3Q8NBI5 491 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 SLC35B2Q8TB61 432 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 ACTL9Q8TC94 416 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 PGBD4Q96DM1 585 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 TMEM121Q9BTD3 319 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 ADAM33Q9BZ11 813 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 INPP5FQ9Y2H2 1132 aa19.09■□□□□ 0.65
COL9A3-205ENST00000466192 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-205ENST00000466192 I3L4J1 428 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 ACSL3O95573 720 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 NPR3P17342 541 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 SCNN1AP37088 669 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 LHX1P48742 406 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 CDH6P55285 790 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 HDAC4P56524 1084 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 OTUD4Q01804 1114 aaKnown RBP19.08■□□□□ 0.65
COL9A3-205ENST00000466192 MMRN1Q13201 1228 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 SCYL2Q6P3W7 929 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 FOXR1Q6PIV2 292 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 CLEC20AQ6ZU45 233 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 ZNF598Q86UK7 904 aaKnown RBP19.08■□□□□ 0.65
COL9A3-205ENST00000466192 ECHDC2Q86YB7 292 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 SLAIN1Q8ND83 568 aa19.08■□□□□ 0.65
COL9A3-205ENST00000466192 ZNF296Q8WUU4 475 aaPredicted RBP19.08■□□□□ 0.65
COL9A3-205ENST00000466192 C11orf84Q9BUA3 381 aaPredicted RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms