RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 AQP7P3A6NL99 342 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 FGF18O76093 207 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 SNHG28P0DPA3 235 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 PPP3CBP16298 524 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 BTF3P20290 206 aaKnown RBP5.15□□□□□ -1.59
LRCH3-211ENST00000466054 FGFR2P21802 821 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 MYO1EQ12965 1108 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 BIRC2Q13490 618 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 SF3B3Q15393 1217 aaKnown RBP5.15□□□□□ -1.59
LRCH3-211ENST00000466054 ZIK1Q3SY52 487 aaPredicted RBP5.15□□□□□ -1.59
LRCH3-211ENST00000466054 TEDDM1Q5T9Z0 273 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 ARHGAP40Q5TG30 622 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 ZNF280BQ86YH2 543 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 LIX1LQ8IVB5 337 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 SLC30A5Q8TAD4 765 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 FBXL20Q96IG2 436 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 PGBD1Q96JS3 809 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 TPSD1Q9BZJ3 242 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 FAM83DQ9H4H8 585 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 WWOXQ9NZC7 414 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 MID2Q9UJV3 735 aa5.15□□□□□ -1.59
LRCH3-211ENST00000466054 A1BGP04217 495 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 MYL4P12829 197 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 KCNA3P22001 575 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 CPT1AP50416 773 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 PTPRRQ15256 657 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 NPY5RQ15761 445 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 NBPF8Q3BBV2 869 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 VPS53Q5VIR6 699 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 RGS7BPQ6MZT1 257 aaPredicted RBP5.14□□□□□ -1.59
LRCH3-211ENST00000466054 HIBCHQ6NVY1 386 aaPredicted RBP5.14□□□□□ -1.59
LRCH3-211ENST00000466054 KRT28Q7Z3Y7 464 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 TECPR1Q7Z6L1 1165 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 PEG10Q86TG7 708 aaKnown RBP5.14□□□□□ -1.59
LRCH3-211ENST00000466054 DTX2Q86UW9 622 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 SLC15A3Q8IY34 581 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.14□□□□□ -1.59
LRCH3-211ENST00000466054 FANCBQ8NB91 859 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 BPIFB1Q8TDL5 484 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 LPIN2Q92539 896 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 RPS6KC1Q96S38 1066 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 ALG8Q9BVK2 526 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 SELENOOQ9BVL4 669 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 ACTRT3Q9BYD9 372 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 CXorf36Q9H7Y0 433 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 DNMT3BQ9UBC3 853 aaKnown RBP5.14□□□□□ -1.59
LRCH3-211ENST00000466054 SSX2IPQ9Y2D8 614 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 CDY1Q9Y6F8 540 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 COMMD10Q9Y6G5 202 aa5.14□□□□□ -1.59
LRCH3-211ENST00000466054 hCG_1984214I3L0E3 225 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 MPPED1O15442 326 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 NCK2O43639 380 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 TLR5O60602 858 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 SETSIPP0DME0 302 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 TPH1P17752 444 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 GRIA3P42263 894 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 PDE6CP51160 858 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 PRKAG1P54619 331 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 ARL13BQ3SXY8 428 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 KLHDC7AQ5VTJ3 777 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 KIAA0895LQ68EN5 471 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 FCRL6Q6DN72 434 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 MZT2AQ6P582 158 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 USP17L6PQ6QN14 398 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 SPARTQ8N0X7 666 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 MYCBPAPQ8TBZ2 947 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 TRIM5Q9C035 493 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 CERS4Q9HA82 394 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 ARFGAP3Q9NP61 516 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 FNIP2Q9P278 1114 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 DKK4Q9UBT3 224 aa5.13□□□□□ -1.59
LRCH3-211ENST00000466054 MRPS17Q9Y2R5 130 aaKnown RBP5.13□□□□□ -1.59
LRCH3-211ENST00000466054 H7C4K7 107 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 RAB27BO00194 218 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 RRP9O43818 475 aaKnown RBP5.12□□□□□ -1.59
LRCH3-211ENST00000466054 PEX14O75381 377 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 NTN1O95631 604 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 CSF1RP07333 972 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 SERPINB3P29508 390 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 PTDSS1P48651 473 aaKnown RBP5.12□□□□□ -1.59
LRCH3-211ENST00000466054 PLCD1P51178 756 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 HNRNPMP52272 730 aaKnown RBP eCLIP5.12□□□□□ -1.59
LRCH3-211ENST00000466054 MAPK10P53779 464 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 PMS2P11Q13670 270 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 ZNF750Q32MQ0 723 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 TMEM119Q4V9L6 283 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 CERCAMQ5T4B2 595 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 MORN5Q5VZ52 161 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 PLAG1Q6DJT9 500 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 SUMO4Q6EEV6 95 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 XRRA1Q6P2D8 792 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 SPICE1Q8N0Z3 855 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 TOR1AIP2Q8NFQ8 470 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 ATRIPQ8WXE1 791 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 TFAP2BQ92481 460 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 PPP2R3CQ969Q6 453 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 ZNF668Q96K58 619 aaPredicted RBP5.12□□□□□ -1.59
LRCH3-211ENST00000466054 ZCWPW1Q9H0M4 648 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 VPS33BQ9H267 617 aa5.12□□□□□ -1.59
LRCH3-211ENST00000466054 HEYLQ9NQ87 328 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 1515 ms