RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 NOP14P78316 857 aaKnown RBP12.56□□□□□ -0.4
CNOT4-208ENST00000465721 SIM1P81133 766 aaPredicted RBP12.56□□□□□ -0.4
CNOT4-208ENST00000465721 SF3A1Q15459 793 aaKnown RBP12.56□□□□□ -0.4
CNOT4-208ENST00000465721 MAPRE1Q15691 268 aaKnown RBP12.56□□□□□ -0.4
CNOT4-208ENST00000465721 EOGTQ5NDL2 527 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 LRSAM1Q6UWE0 723 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 ETFBKMTQ8IXQ9 262 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 OR5B17Q8NGF7 314 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 HPDLQ96IR7 371 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 CAPN10Q9HC96 672 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 ARHGEF4Q9NR80 690 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 INTS13Q9NVM9 706 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
CNOT4-208ENST00000465721 CFAP97Q9P2B7 532 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
CNOT4-208ENST00000465721 FRMD3A2A2Y4 597 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 FAM221BA6H8Z2 402 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.55□□□□□ -0.4
CNOT4-208ENST00000465721 TULP1O00294 542 aaPredicted RBP12.55□□□□□ -0.4
CNOT4-208ENST00000465721 TRIM66O15016 1216 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 CD2BP2O95400 341 aaKnown RBP12.55□□□□□ -0.4
CNOT4-208ENST00000465721 CFIP05156 583 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 ANXA13P27216 316 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 GRIA2P42262 883 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 PPP3CCP48454 512 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 FAM193AP78312 1265 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 CYP27A1Q02318 531 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 MYO1EQ12965 1108 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 MDH1BQ5I0G3 518 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 MYCBPAPQ8TBZ2 947 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 ANKRD36BP1Q96IX9 119 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 ZFRQ96KR1 1074 aaKnown RBP12.55□□□□□ -0.4
CNOT4-208ENST00000465721 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 HCN2Q9UL51 889 aa12.55□□□□□ -0.4
CNOT4-208ENST00000465721 ASXL3Q9C0F0 2248 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 URB1O60287 2271 aaKnown RBP12.54□□□□□ -0.4
CNOT4-208ENST00000465721 FLNBO75369 2602 aaKnown RBP12.54□□□□□ -0.4
CNOT4-208ENST00000465721 TAF4O00268 1085 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 RIOK3O14730 519 aaKnown RBP12.54□□□□□ -0.4
CNOT4-208ENST00000465721 KALRNO60229 2985 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 SERPINF2P08697 491 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 PDGFRBP09619 1106 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 GABRG2P18507 467 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 TNFRSF4P43489 277 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 TAF10Q12962 218 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 ALCAMQ13740 583 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
CNOT4-208ENST00000465721 LY6G5CQ5SRR4 150 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 BRAPQ7Z569 592 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 DDX42Q86XP3 938 aaKnown RBP eCLIP12.54□□□□□ -0.4
CNOT4-208ENST00000465721 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 GPD1LQ8N335 351 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 MINDY1Q8N5J2 469 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 OR2I1PQ8NGU4 316 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 NOC3LQ8WTT2 800 aaKnown RBP12.54□□□□□ -0.4
CNOT4-208ENST00000465721 C8orf48Q96LL4 319 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 MRPL45Q9BRJ2 306 aaKnown RBP12.54□□□□□ -0.4
CNOT4-208ENST00000465721 GTPBP2Q9BX10 602 aaKnown RBP12.54□□□□□ -0.4
CNOT4-208ENST00000465721 CD248Q9HCU0 757 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 EHD2Q9NZN4 543 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 CALCOCO1Q9P1Z2 691 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 SLC6A14Q9UN76 642 aa12.54□□□□□ -0.4
CNOT4-208ENST00000465721 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 H0Y626 953 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 HOXC11O43248 304 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-208ENST00000465721 AP5Z1O43299 807 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 TRIM16O95361 564 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 TNNC2P02585 160 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 MBL2P11226 248 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-208ENST00000465721 CD59P13987 128 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 RPL6Q02878 288 aaKnown RBP12.53□□□□□ -0.4
CNOT4-208ENST00000465721 RABEP1Q15276 862 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 DUOXA1Q1HG43 343 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 RAB44Q7Z6P3 723 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-208ENST00000465721 PROSER1Q86XN7 944 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 MIB1Q86YT6 1006 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 CBWD2Q8IUF1 395 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 HDDC3Q8N4P3 179 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 CHCHD4Q8N4Q1 142 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 ZNF513Q8N8E2 541 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-208ENST00000465721 GLIS3Q8NEA6 775 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 CEP76Q8TAP6 659 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 ZNF518BQ9C0D4 1074 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 DPEP3Q9H4B8 488 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 TBC1D14Q9P2M4 693 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 FBXO2Q9UK22 296 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-208ENST00000465721 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 KNTC1P50748 2209 aa12.53□□□□□ -0.4
CNOT4-208ENST00000465721 IGHV1OR15-9A0A0B4J2B8 117 aa12.52□□□□□ -0.41
CNOT4-208ENST00000465721 A0A1W2PQF6 199 aa12.52□□□□□ -0.41
CNOT4-208ENST00000465721 COCHO43405 550 aa12.52□□□□□ -0.41
CNOT4-208ENST00000465721 OPHN1O60890 802 aa12.52□□□□□ -0.41
CNOT4-208ENST00000465721 TULP3O75386 442 aa12.52□□□□□ -0.41
CNOT4-208ENST00000465721 TACC1O75410 805 aa12.52□□□□□ -0.41
CNOT4-208ENST00000465721 PRPF6O94906 941 aaKnown RBP12.52□□□□□ -0.41
CNOT4-208ENST00000465721 ABL1P00519 1130 aa12.52□□□□□ -0.41
CNOT4-208ENST00000465721 NEFLP07196 543 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms