RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 WNT6Q9Y6F9 365 aa12.72□□□□□ -0.37
TMCO3-205ENST00000465556 RALGAPA1Q6GYQ0 2036 aa12.72□□□□□ -0.37
TMCO3-205ENST00000465556 SPTBN4Q9H254 2564 aa12.72□□□□□ -0.37
TMCO3-205ENST00000465556 FRYLO94915 3013 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 OTOL1A6NHN0 477 aaPredicted RBP12.71□□□□□ -0.37
TMCO3-205ENST00000465556 GFRA3O60609 400 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 ZXDBP98169 803 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 MTAPQ13126 283 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 CUL2Q13617 745 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 PON2Q15165 354 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 EML3Q32P44 896 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 ZNF394Q53GI3 561 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 PPP1R26Q5T8A7 1209 aaPredicted RBP12.71□□□□□ -0.37
TMCO3-205ENST00000465556 GPRIN1Q7Z2K8 1008 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 CPA6Q8N4T0 437 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 SLC4A11Q8NBS3 891 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 TATDN2Q93075 761 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 ATP2A3Q93084 1043 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 CYFIP2Q96F07 1278 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 LMAN1LQ9HAT1 526 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 PNPLA8Q9NP80 782 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 RBM12Q9NTZ6 932 aaKnown RBP12.71□□□□□ -0.37
TMCO3-205ENST00000465556 COMMD8Q9NX08 183 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
TMCO3-205ENST00000465556 SMPD4Q9NXE4 827 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 FBXO4Q9UKT5 387 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 CPQQ9Y646 472 aa12.71□□□□□ -0.37
TMCO3-205ENST00000465556 PRR23AA6NEV1 266 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 HHLA1C9JL84 531 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 LEFTY2O00292 366 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 PMM2O15305 246 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 COCHO43405 550 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 ZDHHC11BP0C7U3 371 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 MBL2P11226 248 aaPredicted RBP12.7□□□□□ -0.38
TMCO3-205ENST00000465556 TUBP50607 506 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 RAD23BP54727 409 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 MARSP56192 900 aaKnown RBP12.7□□□□□ -0.38
TMCO3-205ENST00000465556 CCINQ13939 588 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 ZNF528Q3MIS6 628 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 SNX30Q5VWJ9 437 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 ZC3H14Q6PJT7 736 aaKnown RBP12.7□□□□□ -0.38
TMCO3-205ENST00000465556 Q6ZS52 159 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMCO3-205ENST00000465556 RNF38Q9H0F5 515 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 CLSTN2Q9H4D0 955 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 FBXO44Q9H4M3 255 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 ECT2Q9H8V3 914 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 R4GN57 208 aa12.7□□□□□ -0.38
TMCO3-205ENST00000465556 CYP26A1O43174 497 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 NFATC1O95644 943 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 GNA14O95837 355 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 TBXAS1P24557 533 aaPredicted RBP12.69□□□□□ -0.38
TMCO3-205ENST00000465556 GJA4P35212 333 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 YWHAEP62258 255 aaKnown RBP12.69□□□□□ -0.38
TMCO3-205ENST00000465556 CSTF1Q05048 431 aaKnown RBP12.69□□□□□ -0.38
TMCO3-205ENST00000465556 LRMPQ12912 555 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 GAS6Q14393 721 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 TMEM196Q5HYL7 178 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 DGKKQ5KSL6 1271 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 HECTD3Q5T447 861 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 ARHGAP17Q68EM7 881 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 ASCL5Q7RTU5 278 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 TRIM59Q8IWR1 403 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 UBR7Q8N806 425 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 NKD2Q969F2 451 aaPredicted RBP12.69□□□□□ -0.38
TMCO3-205ENST00000465556 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
TMCO3-205ENST00000465556 HEXIM2Q96MH2 286 aaKnown RBP12.69□□□□□ -0.38
TMCO3-205ENST00000465556 NT5C1BQ96P26 610 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 DUSP16Q9BY84 665 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 CCSER2Q9H7U1 834 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 CFAP97Q9P2B7 532 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 CHORDC1Q9UHD1 332 aaPredicted RBP12.69□□□□□ -0.38
TMCO3-205ENST00000465556 RWDD2AQ9UIY3 292 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 SCML2Q9UQR0 700 aa12.69□□□□□ -0.38
TMCO3-205ENST00000465556 TRDMT1O14717 391 aaKnown RBP12.68□□□□□ -0.38
TMCO3-205ENST00000465556 SCAMP3O14828 347 aaKnown RBP12.68□□□□□ -0.38
TMCO3-205ENST00000465556 P4HA2O15460 535 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 TLR5O60602 858 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 TDGF1P13385 188 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 ACO1P21399 889 aaKnown RBP12.68□□□□□ -0.38
TMCO3-205ENST00000465556 PGFP49763 221 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 CCR3P51677 355 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 AMPD2Q01433 879 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 SATB1Q01826 763 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 NAIF1Q69YI7 327 aaPredicted RBP12.68□□□□□ -0.38
TMCO3-205ENST00000465556 FSTL4Q6MZW2 842 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 TSSK4Q6SA08 328 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 MAMSTRQ6ZN01 415 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 CLEC17AQ6ZS10 378 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 SPEM1Q8N4L4 309 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 SRRTQ9BXP5 876 aaKnown RBP12.68□□□□□ -0.38
TMCO3-205ENST00000465556 TLR8Q9NR97 1041 aaKnown RBP12.68□□□□□ -0.38
TMCO3-205ENST00000465556 CEP250Q9BV73 2442 aa12.68□□□□□ -0.38
TMCO3-205ENST00000465556 SLC9A3R1O14745 358 aaPredicted RBP12.67□□□□□ -0.38
TMCO3-205ENST00000465556 FGFR1OPO95684 399 aaKnown RBP12.67□□□□□ -0.38
TMCO3-205ENST00000465556 AFPP02771 609 aaKnown RBP12.67□□□□□ -0.38
TMCO3-205ENST00000465556 CYP17A1P05093 508 aa12.67□□□□□ -0.38
TMCO3-205ENST00000465556 CCDC192P0DO97 292 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms