RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 SMARCA1P28370 1054 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 UBA7P41226 1012 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 HTR3AP46098 478 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 NDUFV1P49821 464 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 TOB1P50616 345 aaPredicted RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 CCT8P50990 548 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 KRTAP10-9P60411 292 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 KRT85P78386 507 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 GRM1Q13255 1194 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 HABP2Q14520 560 aaPredicted RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 SMC1AQ14683 1233 aaKnown RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 WTAPQ15007 396 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 PPP2R5BQ15173 497 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 LLGL1Q15334 1064 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 PCBP2Q15366 365 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNX4-202ENST00000465505 PTPN14Q15678 1187 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 BRDTQ58F21 947 aaPredicted RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 SPDYCQ5MJ68 293 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 ARMC4Q5T2S8 1044 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 SYDE2Q5VT97 1194 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 TAF2Q6P1X5 1199 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 ABRAXAS1Q6UWZ7 409 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 ZNF782Q6ZMW2 699 aaPredicted RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 BHLHA9Q7RTU4 235 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 TTC7BQ86TV6 843 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 ERC1Q8IUD2 1116 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 ANKRD18AQ8IVF6 992 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 CAMKK1Q8N5S9 505 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 VGLL2Q8N8G2 317 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 SH3KBP1Q96B97 665 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 TBC1D31Q96DN5 1066 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 TEKT5Q96M29 485 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 TPSD1Q9BZJ3 242 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 PNNQ9H307 717 aaKnown RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 BRD9Q9H8M2 597 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 PPCSQ9HAB8 311 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 MAN1C1Q9NR34 630 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 EHD3Q9NZN3 535 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 RABL2AQ9UBK7 228 aaPredicted RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 STAP2Q9UGK3 403 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 TBK1Q9UHD2 729 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 TAGLN3Q9UI15 199 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 BLOC1S6Q9UL45 172 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 AGAP1Q9UPQ3 857 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 NOSIPQ9Y314 301 aaKnown RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 N6AMT1Q9Y5N5 214 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 CFAP20Q9Y6A4 193 aaKnown RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 ZNF804BA4D1E1 1349 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 TARM1B6A8C7 271 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 H0Y3Z8 333 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 XPOTO43592 962 aaKnown RBP3.68□□□□□ -1.82
SNX4-202ENST00000465505 NEMFO60524 1076 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 KRT38O76015 456 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 MYBL2P10244 700 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 JUPP14923 745 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 GLULP15104 373 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 ZFXP17010 805 aaPredicted RBP3.68□□□□□ -1.82
SNX4-202ENST00000465505 DRD4P21917 467 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 RXRGP48443 463 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 PAPOLAP51003 745 aaKnown RBP3.68□□□□□ -1.82
SNX4-202ENST00000465505 UBASH3AP57075 661 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 SNX16P57768 344 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 CTAG1AP78358 180 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 NSUN2Q08J23 767 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNX4-202ENST00000465505 TCF15Q12870 199 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 SLC10A2Q12908 348 aaPredicted RBP3.68□□□□□ -1.82
SNX4-202ENST00000465505 BMPR2Q13873 1038 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 TOMM20Q15388 145 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 PUM3Q15397 648 aaKnown RBP3.68□□□□□ -1.82
SNX4-202ENST00000465505 EZH2Q15910 746 aaKnown RBP3.68□□□□□ -1.82
SNX4-202ENST00000465505 ABCB5Q2M3G0 1257 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 MTX3Q5HYI7 312 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 C11orf87Q6NUJ2 197 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 IRGCQ6NXR0 463 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 MZT2BQ6NZ67 158 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 MZT2AQ6P582 158 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 ZNF449Q6P9G9 518 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 SLC4A10Q6U841 1118 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 BEND5Q7L4P6 421 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 WDR75Q8IWA0 830 aaKnown RBP3.68□□□□□ -1.82
SNX4-202ENST00000465505 OR8H2Q8N162 312 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 FAM109AQ8N4B1 249 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 ZNF366Q8N895 744 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 FAM184AQ8NB25 1140 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 FKBP10Q96AY3 582 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 TBATAQ96M53 351 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 MOGAT1Q96PD6 335 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 ACTRT3Q9BYD9 372 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 CCDC8Q9H0W5 538 aaPredicted RBP3.68□□□□□ -1.82
SNX4-202ENST00000465505 PRKRIP1Q9H875 184 aaPredicted RBP3.68□□□□□ -1.82
SNX4-202ENST00000465505 PLEKHA5Q9HAU0 1116 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 VEZTQ9HBM0 779 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 GPR35Q9HC97 309 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 TCF7L2Q9NQB0 619 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 DDX21Q9NR30 783 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNX4-202ENST00000465505 RLIMQ9NVW2 624 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 IRAK4Q9NWZ3 460 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 SERGEFQ9UGK8 458 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 TRHDEQ9UKU6 1024 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 RRP15Q9Y3B9 282 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms