RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 SNX30Q5VWJ9 437 aa22.13■■□□□ 1.13
CSPG5-204ENST00000465441 CEP135Q66GS9 1140 aa22.13■■□□□ 1.13
CSPG5-204ENST00000465441 FUKQ8N0W3 1084 aa22.13■■□□□ 1.13
CSPG5-204ENST00000465441 CRYBG2Q8N1P7 616 aa22.13■■□□□ 1.13
CSPG5-204ENST00000465441 SPATA32Q96LK8 384 aa22.13■■□□□ 1.13
CSPG5-204ENST00000465441 DUSP15Q9H1R2 295 aaPredicted RBP22.13■■□□□ 1.13
CSPG5-204ENST00000465441 EML5Q05BV3 1969 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 IKBKBO14920 756 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 COCHO43405 550 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 CALUO43852 315 aaPredicted RBP22.12■■□□□ 1.13
CSPG5-204ENST00000465441 AP1G2O75843 785 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 BEST1O76090 585 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 MYL1P05976 194 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 P4HA1P13674 534 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 DGKEP52429 567 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 SLC5A3P53794 718 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 ORC1Q13415 861 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 C1orf220Q5T0J3 134 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 HECTD3Q5T447 861 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 SPOPLQ6IQ16 392 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 DDX42Q86XP3 938 aaKnown RBP eCLIP22.12■■□□□ 1.13
CSPG5-204ENST00000465441 ZMIZ2Q8NF64 920 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 SMARCD1Q96GM5 515 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 SMOQ99835 787 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 DMAP1Q9NPF5 467 aaPredicted RBP22.12■■□□□ 1.13
CSPG5-204ENST00000465441 COMMD8Q9NX08 183 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 TRAF3IP3Q9Y228 551 aa22.12■■□□□ 1.13
CSPG5-204ENST00000465441 ZDHHC11BP0C7U3 371 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 PRR29P0C7W0 189 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 CCDC130P13994 396 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 SYKP43405 635 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 NDST1P52848 882 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 AASDHQ4L235 1098 aaPredicted RBP22.11■■□□□ 1.13
CSPG5-204ENST00000465441 PLA2G2CQ5R387 149 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 CCDC33Q8N5R6 958 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 C12orf50Q8NA57 414 aaPredicted RBP22.11■■□□□ 1.13
CSPG5-204ENST00000465441 TAF4BQ92750 862 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 ZFRQ96KR1 1074 aaKnown RBP22.11■■□□□ 1.13
CSPG5-204ENST00000465441 PNKPQ96T60 521 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 CCSER2Q9H7U1 834 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 RXFP3Q9NSD7 469 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 TBC1D14Q9P2M4 693 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 INVSQ9Y283 1065 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 FRMD4BQ9Y2L6 1034 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 PCDHGA5Q9Y5G8 931 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 MYO16Q9Y6X6 1858 aa22.11■■□□□ 1.13
CSPG5-204ENST00000465441 MYOFQ9NZM1 2061 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 A0A0A0MRY4 1105 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 FAM237AA0A1B0GTK4 181 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 E2F8A0AVK6 867 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 FAM92AA1XBS5 289 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 ASS1P00966 412 aaKnown RBP22.1■■□□□ 1.13
CSPG5-204ENST00000465441 HLA-DRAP01903 254 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 NDUFA8P51970 172 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 KRT85P78386 507 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 MRPS21P82921 87 aaKnown RBP22.1■■□□□ 1.13
CSPG5-204ENST00000465441 MESP2Q0VG99 397 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 UNC93AQ86WB7 457 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 C12orf40Q86WS4 652 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 SFTPA1Q8IWL2 248 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 C12orf29Q8N999 325 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 TSTD1Q8NFU3 115 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 SLC2A14Q8TDB8 520 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 SMOC1Q9H4F8 434 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 CSNK1G1Q9HCP0 422 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.1■■□□□ 1.13
CSPG5-204ENST00000465441 KRT82Q9NSB4 513 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 GMIPQ9P107 970 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 HMGXB4Q9UGU5 601 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 SPAG17Q6Q759 2223 aa22.1■■□□□ 1.13
CSPG5-204ENST00000465441 RHOBTB1O94844 696 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 RHOBTB3O94955 611 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 PGFP49763 221 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 VAMP7P51809 220 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 MAP3K7CLP57077 242 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 PPM1JQ5JR12 505 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 LY6G5CQ5SRR4 150 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 EMC10Q5UCC4 262 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 WBP2Q969T9 261 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 TPSD1Q9BZJ3 242 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 MMP17Q9ULZ9 603 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 MAPK8IP1Q9UQF2 711 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 SH3BP1Q9Y3L3 701 aa22.09■■□□□ 1.13
CSPG5-204ENST00000465441 MAPK13O15264 365 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 KIF20AO95235 890 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 KAT7O95251 611 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 ADH1CP00326 375 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 APODP05090 189 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 ADH5P11766 374 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 TIE1P35590 1138 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 MPLP40238 635 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 EIF2DP41214 584 aaKnown RBP22.08■■□□□ 1.13
CSPG5-204ENST00000465441 ASPAP45381 313 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 LIMK1P53667 647 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 GAD2Q05329 585 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 DPYDQ12882 1025 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 CRY1Q16526 586 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 USP39Q53GS9 565 aaKnown RBP22.08■■□□□ 1.13
CSPG5-204ENST00000465441 TMEM92Q6UXU6 159 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 RASSF3Q86WH2 238 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms