RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PPP2R2AP63151 447 aa22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 TAF5Q15542 800 aa22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 CDO1Q16878 200 aa22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 IZUMO3Q5VZ72 239 aa22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 CYP4V2Q6ZWL3 525 aaPredicted RBP22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 SLC26A9Q7LBE3 791 aa22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 RFX6Q8HWS3 928 aa22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 HAUS1Q96CS2 278 aa22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 SENP8Q96LD8 212 aa22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 TSC2P49815 1807 aa22.74■■□□□ 1.23
PDLIM2-216ENST00000464275 XPO1O14980 1071 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 CD48P09326 243 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 RPL9P32969 192 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 DSC3Q14574 896 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 BOLA3Q53S33 107 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 WSCD1Q658N2 575 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 TTC19Q6DKK2 380 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 CCDC25Q86WR0 208 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 TMEM86AQ8N2M4 240 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 ZNF473Q8WTR7 871 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 TEKT4Q8WW24 435 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 B3GNT5Q9BYG0 378 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 AAASQ9NRG9 546 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 NOD1Q9Y239 953 aa22.73■■□□□ 1.23
PDLIM2-216ENST00000464275 GHRP10912 638 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 PTPN1P18031 435 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 PTPN9P43378 593 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 ARSEP51690 589 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 DYNLT1P63172 113 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 OTUD4Q01804 1114 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 SLC29A2Q14542 456 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 LPIN1Q14693 890 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 KRT71Q3SY84 523 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 MYCBPAPQ8TBZ2 947 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 ACTL9Q8TC94 416 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 CD99L2Q8TCZ2 262 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 FAM172AQ8WUF8 416 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 DUSP16Q9BY84 665 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 FOXP3Q9BZS1 431 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 CENPHQ9H3R5 247 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 NDC80O14777 642 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 RIPK2O43353 540 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 LCP1P13796 627 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 SCNN1GP51170 649 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 CDH6P55285 790 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 SLC8A3P57103 927 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 ATP11AP98196 1134 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 PLCB3Q01970 1234 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 PDK2Q15119 407 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 TRIM71Q2Q1W2 868 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 CCT8L2Q96SF2 557 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 TBCBQ99426 244 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 CALN1Q9BXU9 219 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 OSBPL7Q9BZF2 842 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 NGRNQ9NPE2 291 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 SQORQ9Y6N5 450 aa22.72■■□□□ 1.23
PDLIM2-216ENST00000464275 APOC4-APOC2K7ER74 178 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 DNALI1O14645 258 aaPredicted RBP22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 MGEA5O60502 916 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 TOMM70O94826 608 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 APOC2P02655 101 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 TKTP29401 623 aaKnown RBP22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 CHKAP35790 457 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 LHX1P48742 406 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 CLCNKBP51801 687 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 ACLYP53396 1101 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 P3H1Q32P28 736 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 RAB6CQ53S08 254 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 HIBCHQ6NVY1 386 aaPredicted RBP22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 CEP128Q6ZU80 1094 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 MAP7D3Q8IWC1 876 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 FUKQ8N0W3 1084 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 MAK16Q9BXY0 300 aaKnown RBP22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 RAB6CQ9H0N0 254 aa22.71■■□□□ 1.23
PDLIM2-216ENST00000464275 ATP2C2O75185 946 aa22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 SKIP12755 728 aa22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 HPDP32754 393 aaPredicted RBP22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 AFF1P51825 1210 aaKnown RBP22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 DSTYKQ6XUX3 929 aa22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 CENPTQ96BT3 561 aa22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 TLCD1Q96CP7 247 aa22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 PGBD4Q96DM1 585 aa22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 TMEM109Q9BVC6 243 aa22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 CDC42EP4Q9H3Q1 356 aaKnown RBP22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 PCDH9Q9HC56 1237 aa22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 TRMT13Q9NUP7 481 aaKnown RBP22.7■■□□□ 1.23
PDLIM2-216ENST00000464275 A0A0U1RQF3 1178 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 SHBGP04278 402 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 ACAT1P24752 427 aaKnown RBP22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 TFDP2Q14188 446 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 DPYSL3Q14195 570 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 KRT81Q14533 505 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 EFHC1Q5JVL4 640 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 SCYL2Q6P3W7 929 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 PRUNE1Q86TP1 453 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 RAET1EQ8TD07 263 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 PXYLP1Q8TE99 480 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 CLEC4CQ8WTT0 213 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 PGM2Q96G03 612 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms