RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 FILIP1Q7Z7B0 1213 aa20.42■□□□□ 0.86
CCHCR1-210ENST00000464012 CD101Q93033 1021 aa20.42■□□□□ 0.86
CCHCR1-210ENST00000464012 CFAP97Q9P2B7 532 aa20.42■□□□□ 0.86
CCHCR1-210ENST00000464012 HOOK1Q9UJC3 728 aaKnown RBP20.42■□□□□ 0.86
CCHCR1-210ENST00000464012 EML5Q05BV3 1969 aa20.42■□□□□ 0.86
CCHCR1-210ENST00000464012 FAM200BP0CF97 657 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 PMS1P54277 932 aaKnown RBP20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 NR1H3Q13133 447 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 ZNF394Q53GI3 561 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 ANKRD40Q6AI12 368 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 PRR23BQ6ZRT6 265 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 OVCA2Q8WZ82 227 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 SEMA4DQ92854 862 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 NT5C1AQ9BXI3 368 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 CCSER2Q9H7U1 834 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 CYP3A43Q9HB55 503 aa20.41■□□□□ 0.86
CCHCR1-210ENST00000464012 COCHO43405 550 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 STX10O60499 249 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 PAPSS2O95340 614 aaPredicted RBP20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 DRD1P21728 446 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 GTF2H1P32780 548 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 SRSF5Q13243 272 aaKnown RBP20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 GPRIN1Q7Z2K8 1008 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 FBXL13Q8NEE6 735 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 EXOC4Q96A65 974 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 CYFIP2Q96F07 1278 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 TIGD1Q96MW7 591 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 CSNK1G1Q9HCP0 422 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 RAB23Q9ULC3 237 aa20.4■□□□□ 0.86
CCHCR1-210ENST00000464012 RALGAPA1Q6GYQ0 2036 aa20.39■□□□□ 0.86
CCHCR1-210ENST00000464012 CILPO75339 1184 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 CYP17A1P05093 508 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 COBLL1Q53SF7 1204 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 HECTD3Q5T447 861 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 CLEC20AQ6ZU45 233 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 DDX42Q86XP3 938 aaKnown RBP eCLIP20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 SPATA20Q8TB22 786 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 WHAMMQ8TF30 809 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 SECISBP2LQ93073 1101 aaKnown RBP20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 ARID3AQ99856 593 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 NACA2Q9H009 215 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 POLR3BQ9NW08 1133 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 RAB20Q9NX57 234 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 SLC8A2Q9UPR5 921 aa20.39■□□□□ 0.85
CCHCR1-210ENST00000464012 SLC16A3O15427 465 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 IRF1P10914 325 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 PXNP49023 591 aaPredicted RBP20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 PGFP49763 221 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 FKBP3Q00688 224 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 STIM1Q13586 685 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 CBWD6Q4V339 395 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 CBWD3Q5JTY5 395 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 CBWD5Q5RIA9 395 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 LONP2Q86WA8 852 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 RPLP0P6Q8NHW5 317 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 EZH1Q92800 747 aaPredicted RBP20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 HNRNPABQ99729 332 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 FBXO44Q9H4M3 255 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 COMMD8Q9NX08 183 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 IL37Q9NZH6 218 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 GMEB2Q9UKD1 530 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 MAN1B1Q9UKM7 699 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 OTOGLQ3ZCN5 2332 aa20.38■□□□□ 0.85
CCHCR1-210ENST00000464012 SLC9A3R1O14745 358 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 CYP26A1O43174 497 aa20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 ATG13O75143 517 aa20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 GADD45BO75293 160 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 ACO1P21399 889 aaKnown RBP20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 ID4P47928 161 aa20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 SIM2Q14190 667 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 FBXO43Q4G163 708 aa20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 PPP1R26Q5T8A7 1209 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 KLHL10Q6JEL2 608 aa20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 ZC3H3Q8IXZ2 948 aaKnown RBP20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 TATDN2Q93075 761 aa20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 ZFRQ96KR1 1074 aaKnown RBP20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 DNAI2Q9GZS0 605 aa20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 TLR8Q9NR97 1041 aaKnown RBP20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 CISHQ9NSE2 258 aa20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 SH3BP1Q9Y3L3 701 aa20.37■□□□□ 0.85
CCHCR1-210ENST00000464012 FAM92AA1XBS5 289 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 HHLA1C9JL84 531 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 PSMA7O14818 248 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 HRO43593 1189 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 TLR5O60602 858 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 ZDHHC11BP0C7U3 371 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 OPRD1P41143 372 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 SEC13P55735 322 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 LRRC63Q05C16 580 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 DHCR24Q15392 516 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 SNX30Q5VWJ9 437 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 HEXIM2Q96MH2 286 aaKnown RBP20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 HHIPQ96QV1 700 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 GTPBP4Q9BZE4 634 aaKnown RBP20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 ARMCX3Q9UH62 379 aaPredicted RBP20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 EP300Q09472 2414 aaPredicted RBP20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 GVINP1Q7Z2Y8 2422 aa20.36■□□□□ 0.85
CCHCR1-210ENST00000464012 BIN1O00499 593 aa20.35■□□□□ 0.85
CCHCR1-210ENST00000464012 CD44P16070 742 aaKnown RBP20.35■□□□□ 0.85
CCHCR1-210ENST00000464012 TUBP50607 506 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms