RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 COCHO43405 550 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 BEST1O76090 585 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 OPRD1P41143 372 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 ARHGAP8P85298 464 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 LMNB2Q03252 620 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 DHCR24Q15392 516 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 HECTD3Q5T447 861 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 SNX30Q5VWJ9 437 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.98■□□□□ 0.79
SF3A1-205ENST00000463818 DDX42Q86XP3 938 aaKnown RBP eCLIP19.98■□□□□ 0.79
SF3A1-205ENST00000463818 TAS1R2Q8TE23 839 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 APOBEC3GQ9HC16 384 aaKnown RBP19.98■□□□□ 0.79
SF3A1-205ENST00000463818 FRYLO94915 3013 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 OBSL1O75147 1896 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 KIF26AQ9ULI4 1882 aaPredicted RBP19.97■□□□□ 0.79
SF3A1-205ENST00000463818 CYP17A1P05093 508 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 ZDHHC11BP0C7U3 371 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 MAP3K7CLP57077 242 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 ENPEPQ07075 957 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 GAB4Q2WGN9 574 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 RHBDF2Q6PJF5 856 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 SYT13Q7L8C5 426 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 FAM160A2Q8N612 972 aaPredicted RBP19.97■□□□□ 0.79
SF3A1-205ENST00000463818 GAB3Q8WWW8 586 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 CCDC34Q96HJ3 373 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 HHIPQ96QV1 700 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 TWNKQ96RR1 684 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 IMPG2Q9BZV3 1241 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 CCSER2Q9H7U1 834 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 MMRN2Q9H8L6 949 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 CYP3A43Q9HB55 503 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 CSNK1G1Q9HCP0 422 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 FAM49BQ9NUQ9 324 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 GMIPQ9P107 970 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 CEP250Q9BV73 2442 aa19.97■□□□□ 0.79
SF3A1-205ENST00000463818 FAM92AA1XBS5 289 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 LRP3O75074 770 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 SDHBP21912 280 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 ADORA2BP29275 332 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 SLC6A11P48066 632 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 DMC1Q14565 340 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 ZCWPW2Q504Y3 356 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 SMYD4Q8IYR2 804 aaPredicted RBP19.96■□□□□ 0.79
SF3A1-205ENST00000463818 CCDC26Q8TAB7 109 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 HNRNPABQ99729 332 aaKnown RBP19.96■□□□□ 0.79
SF3A1-205ENST00000463818 NT5C1AQ9BXI3 368 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 SEMA4GQ9NTN9 838 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 GREB1Q4ZG55 1949 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 ANAPC1Q9H1A4 1944 aa19.96■□□□□ 0.79
SF3A1-205ENST00000463818 E2F8A0AVK6 867 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 K7EQS6 105 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 AXIN1O15169 862 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 RPP40O75818 363 aaKnown RBP19.95■□□□□ 0.78
SF3A1-205ENST00000463818 FAM200BP0CF97 657 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 TRIM21P19474 475 aaKnown RBP19.95■□□□□ 0.78
SF3A1-205ENST00000463818 PGFP49763 221 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 ATXN1P54253 815 aaKnown RBP19.95■□□□□ 0.78
SF3A1-205ENST00000463818 MCCD1P59942 119 aaPredicted RBP19.95■□□□□ 0.78
SF3A1-205ENST00000463818 INCA1Q0VD86 236 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 PNOCQ13519 176 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 EDRF1Q3B7T1 1238 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 CACNA2D4Q7Z3S7 1137 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 ACDQ96AP0 544 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 CYFIP2Q96F07 1278 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 EEF2KMTQ96G04 330 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 ZFRQ96KR1 1074 aaKnown RBP19.95■□□□□ 0.78
SF3A1-205ENST00000463818 FBXO44Q9H4M3 255 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 TMEM8AQ9HCN3 771 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 TBC1D14Q9P2M4 693 aa19.95■□□□□ 0.78
SF3A1-205ENST00000463818 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.95■□□□□ 0.78
SF3A1-205ENST00000463818 PTPRDP23468 1912 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 GOLGA6L4A6NEF3 574 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 ANTXRLA6NF34 631 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 CETN3O15182 167 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 CCDC192P0DO97 292 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 CD58P19256 250 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 GTF2H1P32780 548 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 TUBP50607 506 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 SEC13P55735 322 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 CSRP2Q16527 193 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 C2orf27AQ580R0 203 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 KRT39Q6A163 491 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 KBTBD6Q86V97 674 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 FMR1NBQ8N0W7 255 aaPredicted RBP19.94■□□□□ 0.78
SF3A1-205ENST00000463818 CCDC150Q8NCX0 1101 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 USP33Q8TEY7 942 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 WHAMMQ8TF30 809 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 PNKPQ96T60 521 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 NIF3L1Q9GZT8 377 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 SH3BP1Q9Y3L3 701 aa19.94■□□□□ 0.78
SF3A1-205ENST00000463818 ATG2BQ96BY7 2078 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 CILPO75339 1184 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 ADH1CP00326 375 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 PRCPP42785 496 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 BECN1Q14457 450 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 LY6G5CQ5SRR4 150 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 CLEC20AQ6ZU45 233 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 SEMA4DQ92854 862 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 WBP2Q969T9 261 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 JAKMIP2Q96AA8 810 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms