RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 BCKDHBP21953 392 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 NOVA1P51513 510 aaKnown RBP13.08□□□□□ -0.32
RPA3-206ENST00000463632 MRPS21P82921 87 aaKnown RBP13.08□□□□□ -0.32
RPA3-206ENST00000463632 CUL4BQ13620 913 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 NCOA4Q13772 614 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 CRY1Q16526 586 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 EOGTQ5NDL2 527 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 LY6G5CQ5SRR4 150 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 EMC10Q5UCC4 262 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 NUDT18Q6ZVK8 323 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 LPCAT2Q7L5N7 544 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 SFTPA1Q8IWL2 248 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 HSCBQ8IWL3 235 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 SPRYD3Q8NCJ5 442 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 MDGA1Q8NFP4 955 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 SCAMP5Q8TAC9 235 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 GOLGA5Q8TBA6 731 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 KCNK16Q96T55 309 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.32
RPA3-206ENST00000463632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPA3-206ENST00000463632 GMIPQ9P107 970 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 CGNQ9P2M7 1197 aaKnown RBP13.08□□□□□ -0.32
RPA3-206ENST00000463632 NME7Q9Y5B8 376 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 TSC2P49815 1807 aa13.08□□□□□ -0.32
RPA3-206ENST00000463632 SDK1Q7Z5N4 2213 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 PVALEFA0A1B0GWK0 134 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 TCRBV21S2A2A0A5A6 115 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 COCHO43405 550 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 KCNK5O95279 499 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 OAS1P00973 400 aaKnown RBP13.07□□□□□ -0.32
RPA3-206ENST00000463632 GRIA2P42262 883 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 SLC5A3P53794 718 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 GAD2Q05329 585 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 ORC1Q13415 861 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 PREPLQ4J6C6 727 aaPredicted RBP13.07□□□□□ -0.32
RPA3-206ENST00000463632 CEP135Q66GS9 1140 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 PMS2CLQ68D20 193 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 RHBDF2Q6PJF5 856 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 ACOT1Q86TX2 421 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 C12orf40Q86WS4 652 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 WHAMMQ8TF30 809 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 ERLEC1Q96DZ1 483 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 SMARCD1Q96GM5 515 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 CNOT6LQ96LI5 555 aaKnown RBP13.07□□□□□ -0.32
RPA3-206ENST00000463632 LSM14BQ9BX40 385 aaKnown RBP13.07□□□□□ -0.32
RPA3-206ENST00000463632 KRT82Q9NSB4 513 aa13.07□□□□□ -0.32
RPA3-206ENST00000463632 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 E2F8A0AVK6 867 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 PATE3B3GLJ2 98 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 SGK1O00141 431 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 KIF20AO95235 890 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 ZSCAN22P10073 491 aaPredicted RBP13.06□□□□□ -0.32
RPA3-206ENST00000463632 CCDC130P13994 396 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 ADORA2BP29275 332 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 WASP42768 502 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 AP3M2P53677 418 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 MAP3K7CLP57077 242 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 FOXC1Q12948 553 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 BYSLQ13895 437 aaKnown RBP13.06□□□□□ -0.32
RPA3-206ENST00000463632 CNNM4Q6P4Q7 775 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 TMEM92Q6UXU6 159 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 TMEFF1Q8IYR6 380 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 IL17RCQ8NAC3 791 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 XYLT2Q9H1B5 865 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 CCSER2Q9H7U1 834 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 TMEM9BQ9NQ34 198 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 FAM49BQ9NUQ9 324 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 DEC1Q9P2X7 70 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 SERTAD1Q9UHV2 236 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 PCDHA7Q9UN72 937 aa13.06□□□□□ -0.32
RPA3-206ENST00000463632 LRRIQ3A6PVS8 624 aaPredicted RBP13.05□□□□□ -0.32
RPA3-206ENST00000463632 STAU1O95793 577 aaKnown RBP13.05□□□□□ -0.32
RPA3-206ENST00000463632 OLFM2O95897 454 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 F13A1P00488 732 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 CFIP05156 583 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 PIK3CAP42336 1068 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 TNFRSF4P43489 277 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 MAPK8P45983 427 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 NDST1P52848 882 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 ATXN3P54252 364 aaPredicted RBP13.05□□□□□ -0.32
RPA3-206ENST00000463632 IRX4P78413 519 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 GOLGA8FQ08AF8 430 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 GOLGA8DPQ0D2H9 430 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 MESP2Q0VG99 397 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 GAB4Q2WGN9 574 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 C10orf76Q5T2E6 689 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 SH3PXD2AQ5TCZ1 1133 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 SDE2Q6IQ49 451 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 RASSF3Q86WH2 238 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 DEFB119Q8N690 84 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 SLC2A14Q8TDB8 520 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 PARD3BQ8TEW8 1205 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 OVCA2Q8WZ82 227 aa13.05□□□□□ -0.32
RPA3-206ENST00000463632 CCDC47Q96A33 483 aaKnown RBP13.05□□□□□ -0.32
RPA3-206ENST00000463632 NUSAP1Q9BXS6 441 aaKnown RBP13.05□□□□□ -0.32
RPA3-206ENST00000463632 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms