RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TSPY2A6NKD2 308 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ADAMTS3O15072 1205 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 NARSO43776 548 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 JAK2O60674 1132 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 MAFO75444 373 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 PRPF6O94906 941 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ZNF202O95125 648 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 PLEKHA8P1O95397 391 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 MCCP23508 829 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 OAZ1P54368 228 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 PSMC6P62333 389 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ADAM8P78325 824 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 CCT2P78371 535 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 CNTN2Q02246 1040 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ADCY2Q08462 1091 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TCF15Q12870 199 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 FHL2Q14192 279 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 RABEP1Q15276 862 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 PCBP1Q15365 356 aaKnown RBP eCLIP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 FAM83BQ5T0W9 1011 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TMEM63BQ5T3F8 832 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 SNRNP48Q6IEG0 339 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 DEFB128Q7Z7B8 93 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ADGRE4PQ86SQ3 457 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TLK2Q86UE8 772 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ADHFE1Q8IWW8 467 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 DHX37Q8IY37 1157 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 MORC4Q8TE76 937 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 CHTF18Q8WVB6 975 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 UBXN4Q92575 508 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 GFM2Q969S9 779 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 SLC7A6OSQ96CW6 309 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TMX3Q96JJ7 454 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 WDR92Q96MX6 357 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TGS1Q96RS0 853 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 NUP88Q99567 741 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 RAD9AQ99638 391 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 PRRX2Q99811 253 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 SLF1Q9BQI6 1058 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TMEM47Q9BQJ4 181 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 MS4A5Q9H3V2 200 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 UPF2Q9HAU5 1272 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 SLC38A10Q9HBR0 1119 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 PDGFCQ9NRA1 345 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 FANCLQ9NW38 375 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 THG1LQ9NWX6 298 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 FBXO40Q9UH90 709 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ZKSCAN5Q9Y2L8 839 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 CYP46A1Q9Y6A2 500 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TRIOO75962 3097 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 BRWD1Q9NSI6 2320 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ZFHX2Q9C0A1 2572 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ATAD5Q96QE3 1844 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 KLF18A0A0U1RQI7 1052 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ASB14A6NK59 587 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 F5H6K3 240 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 IFIT3O14879 490 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TOX4O94842 621 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 GJB5O95377 273 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 GOLGA8HP0CJ92 632 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TSPY3P0CV98 308 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TSPY8P0CW00 308 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 PDIA3P30101 505 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 MCM5P33992 734 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 PURAQ00577 322 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 KLRC3Q07444 240 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 TROAPQ12815 778 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 EPHA7Q15375 998 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 DUSP28Q4G0W2 176 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 APOA5Q6Q788 366 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 Q6ZRM9 215 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 CCDC83Q8IWF9 413 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ANKRD35Q8N283 1001 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 C7orf31Q8N865 590 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 PLA2G15Q8NCC3 412 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 ESR2Q92731 530 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 MRPL38Q96DV4 380 aaKnown RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 AIFM3Q96NN9 605 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 MTG2Q9H4K7 406 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 SLC2A4RGQ9NR83 387 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 GJB4Q9NTQ9 266 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 POLR3BQ9NW08 1133 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 MTMR4Q9NYA4 1195 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 NYAP2Q9P242 653 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 MAGEC2Q9UBF1 373 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-204ENST00000463622 GIT1Q9Y2X7 761 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 SPO11Q9Y5K1 396 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 USP34Q70CQ2 3546 aa4.13□□□□□ -1.75
SCFD1-204ENST00000463622 CACNA1HO95180 2353 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 FRMPD2Q68DX3 1309 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 ZNF318Q5VUA4 2279 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 ABHD14A-ACY1A0A1B0GW23 586 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 hCG_1642624A0A1W2PR95 340 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 LINC01553A4QN01 128 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 PROB1E7EW31 1015 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 SUV39H1O43463 412 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 CYTH3O43739 400 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 ZBED4O75132 1171 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 RFPL3O75679 317 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 NDUFB10O96000 172 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms