RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 LRRC38Q5VT99 294 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 LMBRD2Q68DH5 695 aaPredicted RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 SPOPLQ6IQ16 392 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 RHBDF2Q6PJF5 856 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 TMEM270Q6UE05 265 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 ALKAL1Q6UXT8 129 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 YTHDF3Q7Z739 585 aaKnown RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CPNE8Q86YQ8 564 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 OR5B17Q8NGF7 314 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CPA5Q8WXQ8 436 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 TMEM169Q96HH4 297 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 FOXP3Q9BZS1 431 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 DCLK3Q9C098 648 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 STMN4Q9H169 189 aaPredicted RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CDT1Q9H211 546 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 NGRNQ9NPE2 291 aaKnown RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 PARVAQ9NVD7 372 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 KLK14Q9P0G3 267 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 ANKFY1Q9P2R3 1169 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 IP6K2Q9UHH9 426 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CPSF3Q9UKF6 684 aaKnown RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 PCDHGC3Q9UN70 934 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 BRWD1Q9NSI6 2320 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 REV3LO60673 3130 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 XIRP2A4UGR9 3374 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CITO14578 2027 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 NRP1O14786 923 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 TRAPPC3O43617 180 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 AGTP01019 485 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 THP07101 528 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 IRS1P35568 1242 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CETN2P41208 172 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 MAGEA9P43362 315 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 COPS2P61201 443 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 YWHAEP62258 255 aaKnown RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 GUCY1A3Q02108 690 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 GRIK3Q13003 919 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 SKIV2LQ15477 1246 aaKnown RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CCNG2Q16589 344 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 DUOXA2Q1HG44 320 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 XKR4Q5GH76 650 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CEP128Q6ZU80 1094 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 MICALCLQ6ZW33 695 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 DDX53Q86TM3 631 aaKnown RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 NLRP14Q86W24 1093 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 BBOF1Q8ND07 529 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 ATL2Q8NHH9 583 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 FEZF2Q8TBJ5 459 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 MYCBPAPQ8TBZ2 947 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 MICAL1Q8TDZ2 1067 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 ATXN2LQ8WWM7 1075 aaKnown RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 ZNF606Q8WXB4 792 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 HLA-CQ95604 372 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 PPP2R3CQ969Q6 453 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 SNF8Q96H20 258 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 ACAP3Q96P50 834 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 NIF3L1Q9GZT8 377 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 PRDM6Q9NQX0 595 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 NOVA2Q9UNW9 492 aaKnown RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 NEU2Q9Y3R4 380 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 A0A087WUV0 522 aaPredicted RBP10.4□□□□□ -0.74
PTPRD-207ENST00000463477 TCRBV5S1A1TA0A578 114 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 C5orf60A6NFR6 353 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 PTGESO14684 152 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 RIPK2O43353 540 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 THAP12O43422 761 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 IVDP26440 423 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 MMP13P45452 471 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 YARSP54577 528 aaKnown RBP10.4□□□□□ -0.74
PTPRD-207ENST00000463477 MAGOHP61326 146 aaKnown RBP10.4□□□□□ -0.74
PTPRD-207ENST00000463477 LMNB2Q03252 620 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 SLC20A2Q08357 652 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 PPP1R7Q15435 360 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 KYAT1Q16773 422 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 CTC1Q2NKJ3 1217 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 DRICH1Q6PGQ1 229 aaPredicted RBP10.4□□□□□ -0.74
PTPRD-207ENST00000463477 TMC7Q7Z402 723 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 ZBTB33Q86T24 672 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 TMEM173Q86WV6 379 aaPredicted RBP10.4□□□□□ -0.74
PTPRD-207ENST00000463477 RELL1Q8IUW5 271 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 NIPA2Q8N8Q9 360 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 CEP120Q8N960 986 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 ZNF473Q8WTR7 871 aaKnown RBP10.4□□□□□ -0.74
PTPRD-207ENST00000463477 CCT8L2Q96SF2 557 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 C11orf70Q9BRQ4 267 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 FAM124BQ9H5Z6 455 aaPredicted RBP10.4□□□□□ -0.74
PTPRD-207ENST00000463477 THEGQ9P2T0 379 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 IRAK3Q9Y616 596 aa10.4□□□□□ -0.74
PTPRD-207ENST00000463477 GMNCA6NCL1 334 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 TMEM191CA6NGB0 347 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 NDC80O14777 642 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 TP73O15350 636 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 TCEA3O75764 348 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 IL18RAPO95256 599 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 EFEMP2O95967 443 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 CPP00450 1065 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 TMEM191BP0C7N4 346 aa10.39□□□□□ -0.75
PTPRD-207ENST00000463477 HPDP32754 393 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms