RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 CRACR2AQ9BSW2 395 aa19.89■□□□□ 0.77
COL9A3-203ENST00000462700 C8orf33Q9H7E9 229 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-203ENST00000462700 HPS4Q9NQG7 708 aa19.89■□□□□ 0.77
COL9A3-203ENST00000462700 TSPAN16Q9UKR8 245 aa19.89■□□□□ 0.77
COL9A3-203ENST00000462700 KIAA1257Q9ULG3 409 aa19.89■□□□□ 0.77
COL9A3-203ENST00000462700 KIF26AQ9ULI4 1882 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-203ENST00000462700 SCML2Q9UQR0 700 aa19.89■□□□□ 0.77
COL9A3-203ENST00000462700 MRPS17Q9Y2R5 130 aaKnown RBP19.89■□□□□ 0.77
COL9A3-203ENST00000462700 CPQQ9Y646 472 aa19.89■□□□□ 0.77
COL9A3-203ENST00000462700 TICRRQ7Z2Z1 1910 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 CYP26A1O43174 497 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 COCHO43405 550 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 SOX9P48436 509 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 PGFP49763 221 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 KIF11P52732 1056 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 PTPN5P54829 565 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 HSP90AA4PQ58FG1 418 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 TRIM65Q6PJ69 517 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 SASS6Q6UVJ0 657 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 GBP6Q6ZN66 633 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 DTWD2Q8NBA8 298 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 ENOX1Q8TC92 643 aaKnown RBP19.88■□□□□ 0.77
COL9A3-203ENST00000462700 OSCP1Q8WVF1 389 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 UBXN6Q9BZV1 441 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 EBF3Q9H4W6 596 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 CCSER2Q9H7U1 834 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 TLR8Q9NR97 1041 aaKnown RBP19.88■□□□□ 0.77
COL9A3-203ENST00000462700 SAMSN1Q9NSI8 373 aaKnown RBP19.88■□□□□ 0.77
COL9A3-203ENST00000462700 NDRG2Q9UN36 371 aaKnown RBP19.88■□□□□ 0.77
COL9A3-203ENST00000462700 ANAPC1Q9H1A4 1944 aa19.88■□□□□ 0.77
COL9A3-203ENST00000462700 GTPBP10A4D1E9 387 aaKnown RBP19.87■□□□□ 0.77
COL9A3-203ENST00000462700 SPECC1L-ADORA2AF8WAN1 911 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 RNF225M0QZC1 329 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-203ENST00000462700 LEFTY2O00292 366 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 O00370 1275 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 MBL2P11226 248 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-203ENST00000462700 SLC9A1P19634 815 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 ZNF132P52740 706 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 BCAT1P54687 386 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 SLC8A3P57103 927 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 RUNX3Q13761 415 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 PDGFRLQ15198 375 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 EXOC3L4Q17RC7 722 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 ITPRIPL2Q3MIP1 535 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 C1orf228Q6PIY5 440 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 PIGZQ86VD9 579 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 RALGPS2Q86X27 583 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-203ENST00000462700 ZNF687Q8N1G0 1237 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 RBBP8NLQ8NC74 664 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-203ENST00000462700 TUBGCP2Q9BSJ2 902 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 UBE2TQ9NPD8 197 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-203ENST00000462700 SMPD4Q9NXE4 827 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 HESX1Q9UBX0 185 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 NFE2L3Q9Y4A8 694 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 WNT6Q9Y6F9 365 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 USP3Q9Y6I4 520 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 ZDBF2Q9HCK1 2354 aa19.87■□□□□ 0.77
COL9A3-203ENST00000462700 KCNJ18B7U540 433 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 XPO1O14980 1071 aaKnown RBP19.86■□□□□ 0.77
COL9A3-203ENST00000462700 PRKCSHP14314 528 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-203ENST00000462700 ARSAP15289 507 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 CTHP32929 405 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 PDE4CQ08493 712 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 BST2Q10589 180 aaKnown RBP19.86■□□□□ 0.77
COL9A3-203ENST00000462700 KCNJ12Q14500 433 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 VWA3BQ502W6 1294 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 RAB41Q5JT25 222 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 MIIPQ5JXC2 388 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 C11orf57Q6ZUT1 292 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-203ENST00000462700 ENOSF1Q7L5Y1 443 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 CCDC186Q7Z3E2 898 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 TFAP2BQ92481 460 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 NDST4Q9H3R1 872 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 NMUR1Q9HB89 426 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 ANO10Q9NW15 660 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 OSER1Q9NX31 292 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 DUS2Q9NX74 493 aaKnown RBP19.86■□□□□ 0.77
COL9A3-203ENST00000462700 TMEM63CQ9P1W3 806 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 CNTN6Q9UQ52 1028 aa19.86■□□□□ 0.77
COL9A3-203ENST00000462700 ZNF638Q14966 1978 aaKnown RBP19.86■□□□□ 0.77
COL9A3-203ENST00000462700 A0A1W2PQH9 124 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 OTOL1A6NHN0 477 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-203ENST00000462700 TULP2O00295 520 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 NCAM2O15394 837 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 TLR5O60602 858 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 PON1P27169 355 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 MAGEA9P43362 315 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 IFNAR2P48551 515 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 FZD5Q13467 585 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 STX1AQ16623 288 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 EML3Q32P44 896 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 TCP11X2Q5H9J9 407 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 GJB7Q6PEY0 223 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 TXNDC11Q6PKC3 985 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 LCLAT1Q6UWP7 414 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 DDX42Q86XP3 938 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL9A3-203ENST00000462700 KIAA1958Q8N8K9 716 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 CLDN23Q96B33 292 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 ZFRQ96KR1 1074 aaKnown RBP19.85■□□□□ 0.77
COL9A3-203ENST00000462700 FAM81BQ96LP2 452 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms