RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 TTLL2Q9BWV7 592 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 PACSIN1Q9BY11 444 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 LACRTQ9GZZ8 138 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 TLE6Q9H808 572 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 RRN3Q9NYV6 651 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 CTTNBP2NLQ9P2B4 639 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 UXTQ9UBK9 157 aaPredicted RBP11.22□□□□□ -0.61
RTF1-202ENST00000462276 SLC27A5Q9Y2P5 690 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 INSL5Q9Y5Q6 135 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 TMEM191CA6NGB0 347 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 CLASP2O75122 1294 aaKnown RBP11.21□□□□□ -0.61
RTF1-202ENST00000462276 SEC24AO95486 1093 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 SRGAP2BP0DMP2 458 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 LCP1P13796 627 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 POU3F3P20264 500 aaPredicted RBP11.21□□□□□ -0.61
RTF1-202ENST00000462276 IRS1P35568 1242 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 NOP2P46087 812 aaKnown RBP11.21□□□□□ -0.61
RTF1-202ENST00000462276 CACNA2D1P54289 1103 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 YWHAZP63104 245 aaKnown RBP11.21□□□□□ -0.61
RTF1-202ENST00000462276 ADIGQ0VDE8 80 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 TAF12Q16514 161 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 DUSP6Q16828 381 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 PABPC1LQ4VXU2 614 aaKnown RBP11.21□□□□□ -0.61
RTF1-202ENST00000462276 PPP1R15BQ5SWA1 713 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 OLFML1Q6UWY5 402 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 ELMOD1Q8N336 334 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 ZNF276Q8N554 614 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 LEMD2Q8NC56 503 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 TRIM58Q8NG06 486 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 SLC22A17Q8WUG5 538 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 TRMT2BQ96GJ1 504 aaKnown RBP11.21□□□□□ -0.61
RTF1-202ENST00000462276 SLITRK1Q96PX8 696 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 ALS2CR12Q96Q35 445 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 CDK5RAP1Q96SZ6 601 aaKnown RBP11.21□□□□□ -0.61
RTF1-202ENST00000462276 NUP85Q9BW27 656 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 CERS4Q9HA82 394 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 LZTFL1Q9NQ48 299 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 TMEM30AQ9NV96 361 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 ZDHHC7Q9NXF8 308 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 TRMT1Q9NXH9 659 aaKnown RBP11.21□□□□□ -0.61
RTF1-202ENST00000462276 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
RTF1-202ENST00000462276 IP6K2Q9UHH9 426 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 YIPF1Q9Y548 306 aa11.21□□□□□ -0.61
RTF1-202ENST00000462276 SLC38A8A6NNN8 435 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 SOBPA7XYQ1 873 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 ESPNB1AK53 854 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 XYLBO75191 536 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 ZMYND10O75800 440 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 GABBR2O75899 941 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 PAPLNO95428 1278 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 LRG1P02750 347 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 C8AP07357 584 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 KCNA4P22459 653 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 MAN1A1P33908 653 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 SLC1A1P43005 524 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 NAP1L1P55209 391 aaKnown RBP11.2□□□□□ -0.62
RTF1-202ENST00000462276 DAOAP59103 153 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 PIGHQ14442 188 aaPredicted RBP11.2□□□□□ -0.62
RTF1-202ENST00000462276 FAM102AQ5T9C2 384 aaPredicted RBP11.2□□□□□ -0.62
RTF1-202ENST00000462276 CYP4A22Q5TCH4 519 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 TMEM184AQ6ZMB5 413 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 FAM183BPQ6ZVS7 135 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 SPRED2Q7Z698 418 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 TADA2BQ86TJ2 420 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 ZNF564Q8TBZ8 553 aaPredicted RBP11.2□□□□□ -0.62
RTF1-202ENST00000462276 CASP10Q92851 521 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 PSMG2Q969U7 264 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 ZNF512Q96ME7 567 aaPredicted RBP11.2□□□□□ -0.62
RTF1-202ENST00000462276 RHOBTB2Q9BYZ6 727 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 ULBP1Q9BZM6 244 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 CRISPLD1Q9H336 500 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 NSUN3Q9H649 340 aaKnown RBP11.2□□□□□ -0.62
RTF1-202ENST00000462276 POPDC2Q9HBU9 364 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 TLR8Q9NR97 1041 aaKnown RBP11.2□□□□□ -0.62
RTF1-202ENST00000462276 DZANK1Q9NVP4 752 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 CLIC5Q9NZA1 410 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 TMEM59LQ9UK28 342 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 GUCA1BQ9UMX6 200 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 PCDHGC5Q9Y5F6 944 aa11.2□□□□□ -0.62
RTF1-202ENST00000462276 CHD9Q3L8U1 2897 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 MACROD2A1Z1Q3 448 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 F9P00740 461 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 USP17L7P0C7H9 530 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 PFKLP17858 780 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 ATF6P18850 670 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 NOS2P35228 1153 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 MATKP42679 507 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 ZNF143P52747 638 aaPredicted RBP11.19□□□□□ -0.62
RTF1-202ENST00000462276 TWF1Q12792 350 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 PPM1LQ5SGD2 360 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 SNX30Q5VWJ9 437 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 C11orf63Q6NUN7 778 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 DNAJB7Q7Z6W7 309 aaPredicted RBP11.19□□□□□ -0.62
RTF1-202ENST00000462276 TTC9BQ8N6N2 239 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 NIPA2Q8N8Q9 360 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 CMASQ8NFW8 434 aaPredicted RBP11.19□□□□□ -0.62
RTF1-202ENST00000462276 TPCN2Q8NHX9 752 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 SCAMP5Q8TAC9 235 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms