RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CAMKK1Q8N5S9 505 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 SPOCK2Q92563 424 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 EZH1Q92800 747 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-207ENST00000461798 CD101Q93033 1021 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 SMARCD1Q96GM5 515 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 CCDC34Q96HJ3 373 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 KCNK16Q96T55 309 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 CYP3A43Q9HB55 503 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 DMAP1Q9NPF5 467 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-207ENST00000461798 DLL3Q9NYJ7 618 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 PCDHGA4Q9Y5G9 962 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 KIF26AQ9ULI4 1882 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-207ENST00000461798 A0A0A0MRY4 1105 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 LRP3O75074 770 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 NFATC1O95644 943 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 RETP07949 1114 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 KRT13P13646 458 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 RAP1GAPP47736 663 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 GCLMP48507 274 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 TUBP50607 506 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 NDST1P52848 882 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 NUCB2P80303 420 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 SIM2Q14190 667 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-207ENST00000461798 GAB4Q2WGN9 574 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 HECTD3Q5T447 861 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 PKN3Q6P5Z2 889 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 SYT13Q7L8C5 426 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 DDX42Q86XP3 938 aaKnown RBP eCLIP9.71□□□□□ -0.86
BRCA1-207ENST00000461798 FAM186BQ8IYM0 893 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 FMR1NBQ8N0W7 255 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-207ENST00000461798 ZMIZ2Q8NF64 920 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 ENGASEQ8NFI3 743 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 CCDC26Q8TAB7 109 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 SCAMP5Q8TAC9 235 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 SPATA20Q8TB22 786 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 TAS1R2Q8TE23 839 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 ELMO3Q96BJ8 720 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 RMDN1Q96DB5 314 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 HNRNPABQ99729 332 aaKnown RBP9.71□□□□□ -0.86
BRCA1-207ENST00000461798 SMOQ99835 787 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 HINFPQ9BQA5 517 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 FAM124BQ9H5Z6 455 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-207ENST00000461798 APOBEC3GQ9HC16 384 aaKnown RBP9.71□□□□□ -0.86
BRCA1-207ENST00000461798 GDPD2Q9HCC8 539 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 TMEM8AQ9HCN3 771 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 CHORDC1Q9UHD1 332 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-207ENST00000461798 RAB23Q9ULC3 237 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 MAPK8IP1Q9UQF2 711 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 CPQQ9Y646 472 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 WDR87Q6ZQQ6 2873 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 CEP250Q9BV73 2442 aa9.71□□□□□ -0.86
BRCA1-207ENST00000461798 CACNA1AO00555 2505 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 E2F8A0AVK6 867 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 PRR5-ARHGAP8B1AHC4 643 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 RNF40O75150 1001 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 AP1G2O75843 785 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 BEST1O76090 585 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 SDHBP21912 280 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 OPRD1P41143 372 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 SLC5A3P53794 718 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 ARHGAP8P85298 464 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 BECN1Q14457 450 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 PUM1Q14671 1186 aaKnown RBP eCLIP9.7□□□□□ -0.86
BRCA1-207ENST00000461798 NAIF1Q69YI7 327 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-207ENST00000461798 KRT39Q6A163 491 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 SPOPLQ6IQ16 392 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 RHBDF2Q6PJF5 856 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 SCARA5Q6ZMJ2 495 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 FILIP1Q7Z7B0 1213 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 ZC3H3Q8IXZ2 948 aaKnown RBP9.7□□□□□ -0.86
BRCA1-207ENST00000461798 ELOA2Q8IYF1 753 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-207ENST00000461798 TTC39CQ8N584 583 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 C12orf29Q8N999 325 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 SLC2A14Q8TDB8 520 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 WHAMMQ8TF30 809 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 FBXO32Q969P5 355 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 OTUB2Q96DC9 234 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 ZFRQ96KR1 1074 aaKnown RBP9.7□□□□□ -0.86
BRCA1-207ENST00000461798 TIGD1Q96MW7 591 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 GSDMAQ96QA5 445 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 MED10Q9BTT4 135 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 NT5C1AQ9BXI3 368 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 GTPBP4Q9BZE4 634 aaKnown RBP9.7□□□□□ -0.86
BRCA1-207ENST00000461798 IMPG2Q9BZV3 1241 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 FBXO44Q9H4M3 255 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 PNPLA8Q9NP80 782 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 RMND1Q9NWS8 449 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 TBC1D14Q9P2M4 693 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 GMEB2Q9UKD1 530 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 SLC8A2Q9UPR5 921 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 GREB1Q4ZG55 1949 aa9.7□□□□□ -0.86
BRCA1-207ENST00000461798 HHLA1C9JL84 531 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 K7EQS6 105 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 CETN3O15182 167 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 COCHO43405 550 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 STX10O60499 249 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 OBSL1O75147 1896 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 CILPO75339 1184 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 ABL1P00519 1130 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms