RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CTHP32929 405 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 RPS9P46781 194 aaKnown RBP23.77■■□□□ 1.4
TRAF4-207ENST00000461195 ARHGAP17Q68EM7 881 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 TRIM68Q6AZZ1 485 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 ZNF687Q8N1G0 1237 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 LMO3Q8TAP4 145 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 JAKMIP2Q96AA8 810 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 CNOT6LQ96LI5 555 aaKnown RBP23.77■■□□□ 1.4
TRAF4-207ENST00000461195 EBF3Q9H4W6 596 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 HPS4Q9NQG7 708 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 DUS2Q9NX74 493 aaKnown RBP23.77■■□□□ 1.4
TRAF4-207ENST00000461195 GMIPQ9P107 970 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 DACH1Q9UI36 760 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 ZDHHC11BP0C7U3 371 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 FZD5Q13467 585 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 TPD52L1Q16890 204 aaPredicted RBP23.76■■□□□ 1.39
TRAF4-207ENST00000461195 DPCR1Q3MIW9 517 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 HECTD3Q5T447 861 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 GPRIN1Q7Z2K8 1008 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 CREBRFQ8IUR6 639 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 C1orf210Q8IVY1 113 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 PPM1KQ8N3J5 372 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 UBR7Q8N806 425 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 EHBP1Q8NDI1 1231 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 OSCP1Q8WVF1 389 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 CPQQ9Y646 472 aa23.76■■□□□ 1.39
TRAF4-207ENST00000461195 RIF1Q5UIP0 2472 aaKnown RBP23.75■■□□□ 1.39
TRAF4-207ENST00000461195 LEFTY2O00292 366 aa23.75■■□□□ 1.39
TRAF4-207ENST00000461195 MBL2P11226 248 aaPredicted RBP23.75■■□□□ 1.39
TRAF4-207ENST00000461195 ARSAP15289 507 aa23.75■■□□□ 1.39
TRAF4-207ENST00000461195 ACO1P21399 889 aaKnown RBP23.75■■□□□ 1.39
TRAF4-207ENST00000461195 IFNAR2P48551 515 aa23.75■■□□□ 1.39
TRAF4-207ENST00000461195 TUBP50607 506 aa23.75■■□□□ 1.39
TRAF4-207ENST00000461195 ZXDBP98169 803 aa23.75■■□□□ 1.39
TRAF4-207ENST00000461195 GPT2Q8TD30 523 aa23.75■■□□□ 1.39
TRAF4-207ENST00000461195 TLR8Q9NR97 1041 aaKnown RBP23.75■■□□□ 1.39
TRAF4-207ENST00000461195 SPATA6Q9NWH7 488 aaPredicted RBP23.75■■□□□ 1.39
TRAF4-207ENST00000461195 SCML2Q9UQR0 700 aa23.75■■□□□ 1.39
TRAF4-207ENST00000461195 SPTBN4Q9H254 2564 aa23.75■■□□□ 1.39
TRAF4-207ENST00000461195 COCHO43405 550 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 SGO2Q562F6 1265 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 TXNDC11Q6PKC3 985 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 DDX42Q86XP3 938 aaKnown RBP eCLIP23.74■■□□□ 1.393e-8■■■□□ 16.5
TRAF4-207ENST00000461195 KIAA1958Q8N8K9 716 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 ANKRD52Q8NB46 1076 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 ATP2A3Q93084 1043 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 LMAN1LQ9HAT1 526 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 SMPD4Q9NXE4 827 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 KIAA1257Q9ULG3 409 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 WNT6Q9Y6F9 365 aa23.74■■□□□ 1.39
TRAF4-207ENST00000461195 OTOL1A6NHN0 477 aaPredicted RBP23.73■■□□□ 1.39
TRAF4-207ENST00000461195 CD19P15391 556 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 ERCC5P28715 1186 aaPredicted RBP23.73■■□□□ 1.39
TRAF4-207ENST00000461195 KIF11P52732 1056 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 SLC8A3P57103 927 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 AMPD2Q01433 879 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 IRF2BP1Q8IU81 584 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 CPA6Q8N4T0 437 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 UBXN6Q9BZV1 441 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 INTS2Q9H0H0 1204 aaKnown RBP23.73■■□□□ 1.39
TRAF4-207ENST00000461195 THAP9Q9H5L6 903 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 CCSER2Q9H7U1 834 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 PCDHB4Q9Y5E5 795 aa23.73■■□□□ 1.39
TRAF4-207ENST00000461195 CYP26A1O43174 497 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 CHRNB1P11230 501 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 VDRP11473 427 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 GCNT1Q02742 428 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 LRRC32Q14392 662 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 PON2Q15165 354 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 GOLGA7BQ2TAP0 167 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 EML3Q32P44 896 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 TMEM270Q6UE05 265 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 RRAGAQ7L523 313 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 ARHGEF19Q8IW93 802 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 KAT5Q92993 513 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 IER2Q9BTL4 223 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 NACA2Q9H009 215 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 CHRDQ9H2X0 955 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 ECT2Q9H8V3 914 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 VPS13AQ96RL7 3174 aa23.72■■□□□ 1.39
TRAF4-207ENST00000461195 PROB1E7EW31 1015 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 LAMTOR5O43504 91 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 TLR5O60602 858 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 PAEPP09466 180 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 MTIF2P46199 727 aaKnown RBP23.71■■□□□ 1.39
TRAF4-207ENST00000461195 PGFP49763 221 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 BCAT1P54687 386 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 CT47A1Q5JQC4 288 aaPredicted RBP23.71■■□□□ 1.39
TRAF4-207ENST00000461195 TTC30AQ86WT1 665 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 FAM114A1Q8IWE2 563 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 LINC00597Q9H2U6 94 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 CFAP97Q9P2B7 532 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 HESX1Q9UBX0 185 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 TSPAN16Q9UKR8 245 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 USP3Q9Y6I4 520 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 CACNA1IQ9P0X4 2223 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 DMDP11532 3685 aa23.71■■□□□ 1.39
TRAF4-207ENST00000461195 FAM186AA6NE01 2351 aa23.7■■□□□ 1.38
TRAF4-207ENST00000461195 SLC9A3R1O14745 358 aaPredicted RBP23.7■■□□□ 1.38
TRAF4-207ENST00000461195 NFATC1O95644 943 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms