RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CFAP97Q9P2B7 532 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 INVSQ9Y283 1065 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 BCLAF3A2AJT9 711 aaKnown RBP15.61■□□□□ 0.09
SMPD4-216ENST00000461187 TNFRSF10BO14763 440 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 PDIA4P13667 645 aaKnown RBP15.61■□□□□ 0.09
SMPD4-216ENST00000461187 AP3M2P53677 418 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 MRPS21P82921 87 aaKnown RBP15.61■□□□□ 0.09
SMPD4-216ENST00000461187 CREB5Q02930 508 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 STK4Q13043 487 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 BIRC3Q13489 604 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 ZNF699Q32M78 642 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 ZNF667Q5HYK9 610 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 TCEAL6Q6IPX3 200 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 FAM35AQ86V20 835 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 C12orf40Q86WS4 652 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 DDX42Q86XP3 938 aaKnown RBP eCLIP15.61■□□□□ 0.09
SMPD4-216ENST00000461187 CCDC33Q8N5R6 958 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 KIAA0895Q8NCT3 520 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 PDZD8Q8NEN9 1154 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 SCAMP5Q8TAC9 235 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 GOLGA5Q8TBA6 731 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 TMEM174Q8WUU8 243 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 OVCA2Q8WZ82 227 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 TCEAL3Q969E4 200 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 FBXO32Q969P5 355 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 ZFRQ96KR1 1074 aaKnown RBP15.61■□□□□ 0.09
SMPD4-216ENST00000461187 TPSD1Q9BZJ3 242 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 IL37Q9NZH6 218 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 CHORDC1Q9UHD1 332 aaPredicted RBP15.61■□□□□ 0.09
SMPD4-216ENST00000461187 SERTAD1Q9UHV2 236 aa15.61■□□□□ 0.09
SMPD4-216ENST00000461187 A0A0A0MRY4 1105 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 E2F8A0AVK6 867 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 COCHO43405 550 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 ACTN4O43707 911 aaKnown RBP15.6■□□□□ 0.09
SMPD4-216ENST00000461187 SLFN14P0C7P3 912 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 HNRNPLP14866 589 aaKnown RBP eCLIP15.6■□□□□ 0.09
SMPD4-216ENST00000461187 KCNA4P22459 653 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 GBP1P32455 592 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 EIF2DP41214 584 aaKnown RBP15.6■□□□□ 0.09
SMPD4-216ENST00000461187 NCOA4Q13772 614 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 PKP1Q13835 747 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 CRY1Q16526 586 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 USP39Q53GS9 565 aaKnown RBP15.6■□□□□ 0.09
SMPD4-216ENST00000461187 SNX30Q5VWJ9 437 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 PMS2CLQ68D20 193 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 ATL3Q6DD88 541 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 ANO7Q6IWH7 933 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 TMEM92Q6UXU6 159 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 SCARA5Q6ZMJ2 495 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 SLC9A9Q8IVB4 645 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 CEP57L1Q8IYX8 460 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 MDGA1Q8NFP4 955 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 TNIP3Q96KP6 325 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 CNOT6LQ96LI5 555 aaKnown RBP15.6■□□□□ 0.09
SMPD4-216ENST00000461187 PNKPQ96T60 521 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 MED10Q9BTT4 135 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 KCTD10Q9H3F6 313 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 TBC1D14Q9P2M4 693 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 RCOR1Q9UKL0 485 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 ATP8B3O60423 1300 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 CACNA1EQ15878 2313 aa15.6■□□□□ 0.09
SMPD4-216ENST00000461187 FAM92AA1XBS5 289 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 KAT7O95251 611 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 CAVIN2O95810 425 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 ADH1CP00326 375 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 APODP05090 189 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 ZDHHC11BP0C7U3 371 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 ADH5P11766 374 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 BCKDHBP21953 392 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 KIR2DL1P43626 348 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-216ENST00000461187 SLC5A3P53794 718 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 DLG4P78352 724 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 DNM1Q05193 864 aaKnown RBP15.59■□□□□ 0.09
SMPD4-216ENST00000461187 LY6G5CQ5SRR4 150 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 HECTD3Q5T447 861 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 N4BP2L1Q5TBK1 243 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-216ENST00000461187 EMC10Q5UCC4 262 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 RNF43Q68DV7 783 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 ACOT1Q86TX2 421 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 C11orf74Q86VG3 221 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 FUKQ8N0W3 1084 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 PHTF2Q8N3S3 785 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 ALLCQ8N6M5 410 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 IL17RCQ8NAC3 791 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 TXNDC5Q8NBS9 432 aaKnown RBP15.59■□□□□ 0.09
SMPD4-216ENST00000461187 ZMIZ2Q8NF64 920 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 SMARCD1Q96GM5 515 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 PAGE5Q96GU1 130 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 LSM14BQ9BX40 385 aaKnown RBP15.59■□□□□ 0.09
SMPD4-216ENST00000461187 CCSER2Q9H7U1 834 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 DMAP1Q9NPF5 467 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-216ENST00000461187 COMMD8Q9NX08 183 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 CFAP45Q9UL16 551 aa15.59■□□□□ 0.09
SMPD4-216ENST00000461187 SGK1O00141 431 aa15.58■□□□□ 0.08
SMPD4-216ENST00000461187 AP1G2O75843 785 aa15.58■□□□□ 0.08
SMPD4-216ENST00000461187 KRT37O76014 449 aa15.58■□□□□ 0.08
SMPD4-216ENST00000461187 BEST1O76090 585 aa15.58■□□□□ 0.08
SMPD4-216ENST00000461187 KLF8O95600 359 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-216ENST00000461187 TIE1P35590 1138 aa15.58■□□□□ 0.08
SMPD4-216ENST00000461187 TUBP50607 506 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms