RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 TMEM108Q6UXF1 575 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 ZNF783Q6ZMS7 281 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 TMPRSS9Q7Z410 1059 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 MPP5Q8N3R9 675 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 OR6B3Q8NGW1 331 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 HMCESQ96FZ2 354 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 ZNF48Q96MX3 618 aaPredicted RBP4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 P2RX7Q99572 595 aaKnown RBP4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 PAGR1Q9BTK6 254 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 AMBRA1Q9C0C7 1298 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 TMEM60Q9H2L4 133 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 ZMAT3Q9HA38 289 aaKnown RBP4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 DKK3Q9UBP4 350 aa4.27□□□□□ -1.73
SPTLC1-203ENST00000461132 TRIM38O00635 465 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 PPEF2O14830 753 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 KCNAB3O43448 404 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 TBC1D4O60343 1298 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 DNAJB5O75953 348 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 THP07101 528 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 SLC7A1P30825 629 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 PXNP49023 591 aaPredicted RBP4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 RENBPP51606 427 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 AGFG1P52594 562 aaKnown RBP4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 UCP3P55916 312 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 TCF15Q12870 199 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 TRIM14Q14142 442 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 GALEQ14376 348 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 SLC4A8Q2Y0W8 1093 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 PCID2Q5JVF3 399 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 LMBRD2Q68DH5 695 aaPredicted RBP4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 KRBA2Q6ZNG9 492 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 MAEAQ7L5Y9 396 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 WDR53Q7Z5U6 358 aaPredicted RBP4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 FAM156AQ8NDB6 213 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 PRSS3P2Q8NHM4 247 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 DEPTORQ8TB45 409 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 MRGPRX1Q96LB2 322 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 NELL2Q99435 816 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 SH2D3AQ9BRG2 576 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 NUP62CLQ9H1M0 184 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 TRMT13Q9NUP7 481 aaKnown RBP4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 ZSCAN32Q9NX65 697 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 ELOVL5Q9NYP7 299 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 XPR1Q9UBH6 696 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 HESX1Q9UBX0 185 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 FBXO2Q9UK22 296 aaPredicted RBP4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 CCNL1Q9UK58 526 aaPredicted RBP4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 MED16Q9Y2X0 877 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 DGKBQ9Y6T7 804 aa4.26□□□□□ -1.73
SPTLC1-203ENST00000461132 KCNU1A8MYU2 1149 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 RASA4BC9J798 803 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 BTN3A1O00481 513 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 RASA4O43374 803 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 TLR5O60602 858 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 LATS1O95835 1130 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 SNHG28P0DPA3 235 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 XRCC6P12956 609 aaKnown RBP eCLIP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 NPR1P16066 1061 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 PEX2P28328 305 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 TKTP29401 623 aaKnown RBP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 CYP2C18P33260 490 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 TM4SF4P48230 202 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 ALDH5A1P51649 535 aaPredicted RBP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 PDE1AP54750 535 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 LOXL3P58215 753 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 LILRA4P59901 499 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 TNFAIP2Q03169 654 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 SLC13A2Q13183 592 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 CNN3Q15417 329 aaKnown RBP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 ELF2Q15723 593 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 SUPT20HL1Q3ZLR7 823 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 CEP78Q5JTW2 689 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 SFRP4Q6FHJ7 346 aaPredicted RBP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 MIS18BP1Q6P0N0 1132 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 CCDC174Q6PII3 467 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 SLC2A7Q6PXP3 512 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 ZNF66Q6ZN08 573 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 DPP9Q86TI2 863 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 SLC15A4Q8N697 577 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 DNAJC5GQ8N7S2 189 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 PDILTQ8N807 584 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 PNLDC1Q8NA58 520 aaKnown RBP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 PPHLN1Q8NEY8 458 aaKnown RBP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 KBTBD7Q8WVZ9 684 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 SGCZQ96LD1 299 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 NAA15Q9BXJ9 866 aaKnown RBP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 QTRT1Q9BXR0 403 aaKnown RBP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 KRTAP1-5Q9BYS1 174 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 TRIM54Q9BYV2 358 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 TUBA8Q9NY65 449 aaPredicted RBP4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 TPCN1Q9ULQ1 816 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 SHOC2Q9UQ13 582 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 PCDHGB6Q9Y5F9 930 aa4.25□□□□□ -1.73
SPTLC1-203ENST00000461132 MYMKA6NI61 221 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 FOXN3O00409 490 aaPredicted RBP4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 TCERG1O14776 1098 aaKnown RBP4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 DCLK1O15075 740 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms