RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ZBED1O96006 694 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 CALB1P05937 261 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 USP17L7P0C7H9 530 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 GZMAP12544 262 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 MYL4P12829 197 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 HMGA1P17096 107 aaKnown RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 PTPN2P17706 415 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 MMP8P22894 467 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 LTBRP36941 435 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 RPL34P49207 117 aaKnown RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 C1QBPQ07021 282 aaKnown RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 MTF1Q14872 753 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 CLUL1Q15846 466 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 ASTE1Q2TB18 679 aaPredicted RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 PABPC1LQ4VXU2 614 aaKnown RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 OR6B2Q6IFH4 312 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 CES5AQ6NT32 575 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 ALKBH5Q6P6C2 394 aaKnown RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 RAD9BQ6WBX8 426 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 FAM183BPQ6ZVS7 135 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 GRASPQ7Z6J2 395 aaPredicted RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 TMEM110Q86TL2 294 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 DNAAF5Q86Y56 855 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 PHF13Q86YI8 300 aaPredicted RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 TMC8Q8IU68 726 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 CCDC170Q8IYT3 715 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 HS6ST3Q8IZP7 471 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 CLEC4CQ8WTT0 213 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 ZNF653Q96CK0 615 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 C18orf8Q96DM3 657 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 GCNAQ96QF7 691 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 PPP1R9BQ96SB3 815 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 TTLL2Q9BWV7 592 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 UBE2ZQ9H832 354 aaPredicted RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 ZNF334Q9HCZ1 680 aaPredicted RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 CNGB3Q9NQW8 809 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 COMMD8Q9NX08 183 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 ADAM22Q9P0K1 906 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 GMIPQ9P107 970 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 DNMT3BQ9UBC3 853 aaKnown RBP10.7□□□□□ -0.7
UPF2-204ENST00000460569 NOTCH4Q99466 2003 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 GOLGA8SH3BPF8 625 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 H3BQ06 376 aaPredicted RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 PAPSS1O43252 624 aaPredicted RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 ATMINO43313 823 aaPredicted RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 NDUFA10O95299 355 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 FTLP02792 175 aaPredicted RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 RHOP08100 348 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 ABCB4P21439 1286 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 KCNA5P22460 613 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 GABRR2P28476 465 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 GABRB2P47870 512 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 DAOAP59103 153 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 NTHL1P78549 312 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 CCZ1BP86790 482 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 CCZ1P86791 482 aaPredicted RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 ITIH3Q06033 890 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 TAF10Q12962 218 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 PTP4A2Q12974 167 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 SPA17Q15506 151 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 FAM102AQ5T9C2 384 aaPredicted RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 TOGARAM2Q6ZUX3 1019 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 PDZD4Q76G19 769 aaPredicted RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 GPR149Q86SP6 731 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 PHLDB2Q86SQ0 1253 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 XYLT1Q86Y38 959 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 SCUBE3Q8IX30 993 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 MCOLN2Q8IZK6 566 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 LEMD2Q8NC56 503 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 PDZD8Q8NEN9 1154 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 MAFAQ8NHW3 353 aaPredicted RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 NDRG1Q92597 394 aaKnown RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 FAM149B1Q96BN6 582 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 TRIM11Q96F44 468 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 MSLNLQ96KJ4 702 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 MYRFLQ96LU7 910 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 ISCUQ9H1K1 167 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 ADAM7Q9H2U9 754 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 IL37Q9NZH6 218 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 CD207Q9UJ71 328 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 CDH22Q9UJ99 828 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 STRIP2Q9ULQ0 834 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 NENFQ9UMX5 172 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 SCML2Q9UQR0 700 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 EPN1Q9Y6I3 576 aaPredicted RBP10.69□□□□□ -0.7
UPF2-204ENST00000460569 USP3Q9Y6I4 520 aa10.69□□□□□ -0.7
UPF2-204ENST00000460569 SZT2Q5T011 3432 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 HELZP42694 1942 aaKnown RBP10.68□□□□□ -0.7
UPF2-204ENST00000460569 NCANO14594 1321 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 CLUHO75153 1309 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 A0A1W2PQH9 124 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 A0A1W2PRU2 124 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 FAM92AA1XBS5 289 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 EIF3CLB5ME19 914 aaKnown RBP10.68□□□□□ -0.7
UPF2-204ENST00000460569 ZNF263O14978 683 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 ARHGAP6O43182 974 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 SART1O43290 800 aaKnown RBP10.68□□□□□ -0.7
UPF2-204ENST00000460569 TADA3O75528 432 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 PAPLNO95428 1278 aa10.68□□□□□ -0.7
UPF2-204ENST00000460569 FGF19O95750 216 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms