RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 DDX42Q86XP3 938 aaKnown RBP eCLIP8.43□□□□□ -1.062e-17■□□□□ 9.6
SFPQ-202ENST00000460428 RELL1Q8IUW5 271 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 CCDC50Q8IVM0 306 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 CCDC89Q8N998 374 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 TSEN2Q8NCE0 465 aaKnown RBP8.43□□□□□ -1.06
SFPQ-202ENST00000460428 BBOF1Q8ND07 529 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 C1orf54Q8WWF1 131 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 PIK3R5Q8WYR1 880 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 IRGQQ8WZA9 623 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 PGAP3Q96FM1 320 aaPredicted RBP8.43□□□□□ -1.06
SFPQ-202ENST00000460428 PCED1BQ96HM7 432 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 SLC2A13Q96QE2 648 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 PEBP4Q96S96 227 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 SLC9A7Q96T83 725 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 FMO2Q99518 471 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 SMOQ99835 787 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 HINFPQ9BQA5 517 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 FOXP3Q9BZS1 431 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 TSPYL1Q9H0U9 437 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 CNGB3Q9NQW8 809 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 TMEM51Q9NW97 253 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 R3HDM2Q9Y2K5 976 aaKnown RBP8.43□□□□□ -1.06
SFPQ-202ENST00000460428 USP3Q9Y6I4 520 aa8.43□□□□□ -1.06
SFPQ-202ENST00000460428 LRRD1A4D1F6 860 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 GOLGA6BA6NDN3 693 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 CASTOR2A6NHX0 329 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 H0YGN5 161 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 H3BQF6 201 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 APOC4-APOC2K7ER74 178 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 HOXA2O43364 376 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 PRPSAP2O60256 369 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 OPA1O60313 960 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 BEST1O76090 585 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 DDHD2O94830 711 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 APOC2P02655 101 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 FAM200BP0CF97 657 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 RARGP13631 454 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 KRT10P13645 584 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 DESP17661 470 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 SSR1P43307 286 aaKnown RBP8.42□□□□□ -1.06
SFPQ-202ENST00000460428 TNNT3P45378 269 aaPredicted RBP8.42□□□□□ -1.06
SFPQ-202ENST00000460428 AIF1P55008 147 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 VCPP55072 806 aaKnown RBP8.42□□□□□ -1.06
SFPQ-202ENST00000460428 DAOAP59103 153 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 YWHAZP63104 245 aaKnown RBP8.42□□□□□ -1.06
SFPQ-202ENST00000460428 KRT17Q04695 432 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 GABPB1Q06547 395 aaPredicted RBP8.42□□□□□ -1.06
SFPQ-202ENST00000460428 BYSLQ13895 437 aaKnown RBP8.42□□□□□ -1.06
SFPQ-202ENST00000460428 TFDP2Q14188 446 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 DPYSL3Q14195 570 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 MRPL58Q14197 206 aaKnown RBP8.42□□□□□ -1.06
SFPQ-202ENST00000460428 HLTFQ14527 1009 aaKnown RBP eCLIP8.42□□□□□ -1.069e-6■□□□□ 9.4
SFPQ-202ENST00000460428 SLMAPQ14BN4 828 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 DPYSL2Q16555 572 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 SLC25A52Q3SY17 297 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 MDH1BQ5I0G3 518 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 CFAP58Q5T655 872 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 ERMARDQ5T6L9 678 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 SLC9A4Q6AI14 798 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 FAM35AQ86V20 835 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 MAP7D3Q8IWC1 876 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 THEM5Q8N1Q8 247 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 ALLCQ8N6M5 410 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 ZMIZ2Q8NF64 920 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 DBF4BQ8NFT6 615 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 URGCPQ8TCY9 931 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 SH3TC2Q8TF17 1288 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 FAM172AQ8WUF8 416 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 SEPT8Q92599 483 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 SMARCD1Q96GM5 515 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 RNF157Q96PX1 679 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 NPY6RQ99463 290 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 ZNF670Q9BS34 389 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 TMEM175Q9BSA9 504 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 HEMGNQ9BXL5 484 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 TBC1D13Q9NVG8 400 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 WBP1LQ9NX94 342 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 RRN3Q9NYV6 651 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.42□□□□□ -1.063e-7■■□□□ 14.1
SFPQ-202ENST00000460428 RCOR3Q9P2K3 495 aaPredicted RBP8.42□□□□□ -1.06
SFPQ-202ENST00000460428 DNPEPQ9ULA0 475 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 SNX24Q9Y343 169 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 NFS1Q9Y697 457 aa8.42□□□□□ -1.06
SFPQ-202ENST00000460428 PI4K2BG5E9Z4 385 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 SMAPO00193 183 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 CLDN5O00501 218 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 TRAPPC3O43617 180 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 B4GALT3O60512 393 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 CST8O60676 142 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 EFEMP2O95967 443 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 FYNP06241 537 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 NUDT17P0C025 328 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 CCL5P13501 91 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 TGM2P21980 687 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 ACAT1P24752 427 aaKnown RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 OAS2P29728 719 aaKnown RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 STIP1P31948 543 aaKnown RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 HSD17B3P37058 310 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms