RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 FAM98AQ8NCA5 519 aaKnown RBP4.05□□□□□ -1.76
RFC4-211ENST00000460408 DNAJB14Q8TBM8 379 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 MYCBPAPQ8TBZ2 947 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 ATG4AQ8WYN0 398 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 NELL1Q92832 810 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 SNX27Q96L92 541 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 FAM227BQ96M60 508 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 TMEM8AQ9HCN3 771 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 IGSF9Q9P2J2 1179 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 VPS51Q9UID3 782 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 SERTAD3Q9UJW9 196 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 CEP83Q9Y592 693 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 PIPSLA2A3N6 862 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 OR2W5A6NFC9 320 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 NPC1O15118 1278 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 PPM1DO15297 605 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 PIP5K1CO60331 668 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 NBNO60934 754 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 SRGAP2O75044 1071 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 RASAL1O95294 804 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 PDHA1P08559 390 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 ARP10275 920 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 ADORA2AP29274 412 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 ATICP31939 592 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 PDE6CP51160 858 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 ITGA8P53708 1063 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 SEC24CP53992 1094 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 PRKAG1P54619 331 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 BCAT1P54687 386 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 TIAL1Q01085 375 aaKnown RBP eCLIP4.04□□□□□ -1.76
RFC4-211ENST00000460408 ITIH3Q06033 890 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 SF3B3Q15393 1217 aaKnown RBP4.04□□□□□ -1.76
RFC4-211ENST00000460408 SLC5A9Q2M3M2 681 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 INO80DQ53TQ3 878 aaPredicted RBP4.04□□□□□ -1.76
RFC4-211ENST00000460408 RAP1GAP2Q684P5 730 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 PGBD2Q6P3X8 592 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 DTX2Q86UW9 622 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 LCORLQ8N3X6 602 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 ZNF527Q8NB42 609 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 SMCR8Q8TEV9 937 aaPredicted RBP4.04□□□□□ -1.76
RFC4-211ENST00000460408 PTCD3Q96EY7 689 aaKnown RBP4.04□□□□□ -1.76
RFC4-211ENST00000460408 ACTRT3Q9BYD9 372 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 TPSD1Q9BZJ3 242 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.04□□□□□ -1.764e-15■■□□□ 11.5
RFC4-211ENST00000460408 PPCSQ9HAB8 311 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 GBA2Q9HCG7 927 aaPredicted RBP4.04□□□□□ -1.76
RFC4-211ENST00000460408 ZBTB26Q9HCK0 441 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 TBCCD1Q9NVR7 557 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 MAGED2Q9UNF1 606 aaPredicted RBP4.04□□□□□ -1.76
RFC4-211ENST00000460408 HPSEQ9Y251 543 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 SNX14Q9Y5W7 946 aa4.04□□□□□ -1.76
RFC4-211ENST00000460408 ADGRA2Q96PE1 1338 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 LGALS16A8MUM7 142 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 VWC2LB2RUY7 222 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 AGPSO00116 658 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 SYT5O00445 386 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 DHHO43323 396 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 SKAP2O75563 359 aaPredicted RBP4.03□□□□□ -1.76
RFC4-211ENST00000460408 CSTBP04080 98 aaKnown RBP4.03□□□□□ -1.76
RFC4-211ENST00000460408 RHOP08100 348 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ITGAMP11215 1152 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 HGFP14210 728 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 VEGFAP15692 232 aaPredicted RBP4.03□□□□□ -1.76
RFC4-211ENST00000460408 PECAM1P16284 738 aaPredicted RBP4.03□□□□□ -1.76
RFC4-211ENST00000460408 SLC5A2P31639 672 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ELLP55199 621 aaPredicted RBP4.03□□□□□ -1.76
RFC4-211ENST00000460408 FOXI1Q12951 378 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 FHL3Q13643 280 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 CCNIQ14094 377 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 MAPKAPK3Q16644 382 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 PFKFB4Q16877 469 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ERCC6LQ2NKX8 1250 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ZACNQ401N2 412 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ARHGAP15Q53QZ3 475 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 EPHA10Q5JZY3 1008 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 TMTC4Q5T4D3 741 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ABHD17BQ5VST6 288 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 KIAA0895LQ68EN5 471 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 MRNIPQ6NTE8 343 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 MZT2AQ6P582 158 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 TLDC1Q6P9B6 456 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 CCDC174Q6PII3 467 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 FBXO38Q6PIJ6 1188 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 CERS3Q8IU89 383 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 CACNA2D3Q8IZS8 1091 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 SPARTQ8N0X7 666 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ABRAQ8N0Z2 381 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 B3GALNT2Q8NCR0 500 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 CCDC150Q8NCX0 1101 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 SIMC1Q8NDZ2 872 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 IPO4Q8TEX9 1081 aaKnown RBP4.03□□□□□ -1.76
RFC4-211ENST00000460408 TMEM171Q8WVE6 324 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 MUL1Q969V5 352 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ZDHHC12Q96GR4 267 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ZNF668Q96K58 619 aaPredicted RBP4.03□□□□□ -1.76
RFC4-211ENST00000460408 PCDHAC1Q9H158 963 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ALG13Q9NP73 1137 aaKnown RBP4.03□□□□□ -1.76
RFC4-211ENST00000460408 KCTD5Q9NXV2 234 aa4.03□□□□□ -1.76
RFC4-211ENST00000460408 ZMYND8Q9ULU4 1186 aaPredicted RBP4.03□□□□□ -1.76
RFC4-211ENST00000460408 AQP12BA6NM10 295 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms