RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ITGB5P18084 799 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 CNTFP26441 200 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 NNMTP40261 264 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 IL31Q6EBC2 164 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 TATDN1Q6P1N9 297 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 OLA1Q9NTK5 396 aaKnown RBP15.29■□□□□ 0.04
PTPRU-205ENST00000460170 B3GAT3O94766 335 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 TMED1Q13445 227 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 ACCSLQ4AC99 568 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
PTPRU-205ENST00000460170 REPS2Q8NFH8 660 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 YY1AP1Q9H869 796 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 LMCD1Q9NZU5 365 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 SNX5Q9Y5X3 404 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 FMN2Q9NZ56 1722 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 PPP1R11O60927 126 aaPredicted RBP15.29■□□□□ 0.04
PTPRU-205ENST00000460170 ODC1P11926 461 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 CYP2F1P24903 491 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 SSTR1P30872 391 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 CDH8P55286 799 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 DYNC1I2Q13409 638 aaKnown RBP15.29■□□□□ 0.04
PTPRU-205ENST00000460170 NFIL3Q16649 462 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 FBXO47Q5MNV8 452 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 HSD3B7Q9H2F3 369 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 DRG2P55039 364 aaKnown RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 MRPS35P82673 323 aaKnown RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 FAM83EQ2M2I3 478 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 TMEM154Q6P9G4 183 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 EME1Q96AY2 570 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 SLC4A7Q9Y6M7 1214 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 ZBBXA8MT70 800 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 F8VP50 259 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 GCLCP48506 637 aaPredicted RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 ZNF157P51786 506 aaPredicted RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 LBRQ14739 615 aaKnown RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 PRELID2Q8N945 189 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 SGF29Q96ES7 293 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 PRKAG2Q9UGJ0 569 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 AFF4Q9UHB7 1163 aaKnown RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 ARHGAP26Q9UNA1 814 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 RBAK-RBAKDNI3L0D1 243 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 BGNP21810 368 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 SERPINB8P50452 374 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 GTF2A2P52657 109 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 RCN1Q15293 331 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 ZCCHC9Q8N567 271 aaKnown RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 SHCBP1Q8NEM2 672 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 APBB2Q92870 758 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 SHCBP1LQ9BZQ2 653 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 HMOX2P30519 316 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 GEMP55040 296 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 AQP5P55064 265 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 CHSY1Q86X52 802 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 TRAPPC12Q8WVT3 735 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 ZNF512Q96ME7 567 aaPredicted RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 VAV3Q9UKW4 847 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 AAR2Q9Y312 384 aaKnown RBP15.28■□□□□ 0.04
PTPRU-205ENST00000460170 SLC30A1Q9Y6M5 507 aa15.28■□□□□ 0.04
PTPRU-205ENST00000460170 CALB2P22676 271 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 OR1G1P47890 313 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 FMO1Q01740 532 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 BMPR2Q13873 1038 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 CYTH1Q15438 398 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 PLEKHH3Q7Z736 793 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 SEPT5Q99719 369 aaPredicted RBP15.27■□□□□ 0.04
PTPRU-205ENST00000460170 TMEM120AQ9BXJ8 343 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 TMEM134Q9H6X4 195 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 ZC3H4Q9UPT8 1303 aaKnown RBP15.27■□□□□ 0.04
PTPRU-205ENST00000460170 AKAP12Q02952 1782 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 KIF1CO43896 1103 aaKnown RBP15.27■□□□□ 0.04
PTPRU-205ENST00000460170 MICAL2O94851 1124 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 FBXO21O94952 628 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 PYGLP06737 847 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 ITGB3BPQ13352 177 aaPredicted RBP15.27■□□□□ 0.04
PTPRU-205ENST00000460170 ERMARDQ5T6L9 678 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 IL31RAQ8NI17 732 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 P2RX7Q99572 595 aaKnown RBP15.27■□□□□ 0.04
PTPRU-205ENST00000460170 FGFBP2Q9BYJ0 223 aa15.27■□□□□ 0.04
PTPRU-205ENST00000460170 SYCE1LA8MT33 242 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 DNAJC6O75061 913 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 DGKIO75912 1065 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 MIPP30301 263 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 ACAP1Q15027 740 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 MGAT5BQ3V5L5 792 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 EFHBQ8N7U6 833 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 OSMRQ99650 979 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 MARCKSL1P49006 195 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 PKN2Q16513 984 aaKnown RBP15.27■□□□□ 0.03
PTPRU-205ENST00000460170 TCP10LQ8TDR4 215 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 ASPSCR1Q9BZE9 553 aa15.27■□□□□ 0.03
PTPRU-205ENST00000460170 PLSCR1O15162 318 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 SRP72O76094 671 aaKnown RBP15.26■□□□□ 0.03
PTPRU-205ENST00000460170 SLC2A3P11169 496 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 PTPRAP18433 802 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 TCN1P20061 433 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms