RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 LPIN2Q92539 896 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 HAS1Q92839 578 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 GCC1Q96CN9 775 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 GLOD4Q9HC38 313 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 CASS4Q9NQ75 786 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 ANKFY1Q9P2R3 1169 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 RAPGEFL1Q9UHV5 662 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 VPS51Q9UID3 782 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 A1L4Q6 167 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 OR2W5A6NFC9 320 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 J3KTA2 159 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 IRAK2O43187 625 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 PPFIA4O75335 1185 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 VNN1O95497 513 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 ANXA6P08133 673 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 C1SP09871 688 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 ITGAMP11215 1152 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 NXPH1P58417 271 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 TIRAPP58753 221 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 RINT1Q6NUQ1 792 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 ARHGEF19Q8IW93 802 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 SUGP1Q8IWZ8 645 aaKnown RBP6.35□□□□□ -1.39
CCDC50-203ENST00000460064 NRSN1Q8IZ57 195 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 OR1N1Q8NGS0 311 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 MBD3L2Q8NHZ7 208 aaPredicted RBP6.35□□□□□ -1.39
CCDC50-203ENST00000460064 GLG1Q92896 1179 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 FUBP1Q96AE4 644 aaKnown RBP6.35□□□□□ -1.39
CCDC50-203ENST00000460064 ZSCAN31Q96LW9 406 aaPredicted RBP6.35□□□□□ -1.39
CCDC50-203ENST00000460064 VN1R3Q9BXE9 311 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 TP63Q9H3D4 680 aaPredicted RBP6.35□□□□□ -1.39
CCDC50-203ENST00000460064 NRDE2Q9H7Z3 1164 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 MLXIPQ9HAP2 919 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 C9orf78Q9NZ63 289 aaPredicted RBP6.35□□□□□ -1.39
CCDC50-203ENST00000460064 DRG1Q9Y295 367 aaKnown RBP6.35□□□□□ -1.39
CCDC50-203ENST00000460064 SLC27A6Q9Y2P4 619 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 TSC22D4Q9Y3Q8 395 aa6.35□□□□□ -1.39
CCDC50-203ENST00000460064 CENPVL1A0A0U1RR11 272 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 HMX3A6NHT5 357 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 PSMD9O00233 223 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 EXOC5O00471 708 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 SH3BP5O60239 455 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 ACTL6BO94805 426 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 ZNF20P17024 532 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 PTGS2P35354 604 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 ATXN1P54253 815 aaKnown RBP6.34□□□□□ -1.39
CCDC50-203ENST00000460064 AP2B1P63010 937 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 TIAL1Q01085 375 aaKnown RBP eCLIP6.34□□□□□ -1.39
CCDC50-203ENST00000460064 FHL3Q13643 280 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 GRM4Q14833 912 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 TBCCQ15814 346 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 FBLN7Q53RD9 439 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 ALFQ53S48 1182 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 ANKRD45Q5TZF3 282 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 LIN54Q6MZP7 749 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 RNF207Q6ZRF8 634 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 CAND1Q86VP6 1230 aaKnown RBP6.34□□□□□ -1.39
CCDC50-203ENST00000460064 LNX2Q8N448 690 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 SUN3Q8TAQ9 357 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 MYCBPAPQ8TBZ2 947 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 HAPLN3Q96S86 360 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 NAP1L4Q99733 375 aaKnown RBP6.34□□□□□ -1.39
CCDC50-203ENST00000460064 SLC2A4RGQ9NR83 387 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 KIF17Q9P2E2 1029 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 LPAR3Q9UBY5 353 aa6.34□□□□□ -1.39
CCDC50-203ENST00000460064 NKX1-2Q9UD57 310 aaPredicted RBP6.34□□□□□ -1.39
CCDC50-203ENST00000460064 SRP68Q9UHB9 627 aaKnown RBP6.34□□□□□ -1.39
CCDC50-203ENST00000460064 PCDH17O14917 1159 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 YY2O15391 372 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 SLC16A3O15427 465 aaKnown RBP6.33□□□□□ -1.4
CCDC50-203ENST00000460064 PEX11BO96011 259 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 RHOP08100 348 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 CD19P15391 556 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 KLRK1P26718 216 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 RBL1P28749 1068 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 AKT1P31749 480 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 DGCR2P98153 550 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 SCAPQ12770 1279 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 CDSNQ15517 529 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 TREML2Q5T2D2 321 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 VWA1Q6PCB0 445 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 MOGAT3Q86VF5 341 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 RAB11FIP4Q86YS3 637 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 SLC44A2Q8IWA5 706 aaPredicted RBP6.33□□□□□ -1.4
CCDC50-203ENST00000460064 SCAMP5Q8TAC9 235 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 WDR60Q8WVS4 1066 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 XAGE5Q8WWM1 108 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 FKBP10Q96AY3 582 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 FBXL20Q96IG2 436 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 PGBD1Q96JS3 809 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 RTKNQ9BST9 563 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 DPCDQ9BVM2 203 aaPredicted RBP6.33□□□□□ -1.4
CCDC50-203ENST00000460064 C1QTNF3Q9BXJ4 246 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 PABPC3Q9H361 631 aaKnown RBP6.33□□□□□ -1.4
CCDC50-203ENST00000460064 SAYSD1Q9NPB0 183 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 SAGE1Q9NXZ1 904 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 RRN3Q9NYV6 651 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 STEAP1Q9UHE8 339 aa6.33□□□□□ -1.4
CCDC50-203ENST00000460064 COL15A1P39059 1388 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 WDHD1O75717 1129 aaPredicted RBP6.32□□□□□ -1.4
CCDC50-203ENST00000460064 FESP07332 822 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms